Aliases for RNU6-306P Gene

Aliases for RNU6-306P Gene

  • RNA, U6 Small Nuclear 306, Pseudogene 2 3 5
  • RNU6-306P 5

External Ids for RNU6-306P Gene

Previous GeneCards Identifiers for RNU6-306P Gene

  • GC10M021854
  • GC00U935909

Summaries for RNU6-306P Gene

GeneCards Summary for RNU6-306P Gene

RNU6-306P (RNA, U6 Small Nuclear 306, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-306P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU6-306P Gene

Genomics for RNU6-306P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNU6-306P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J021637 Enhancer 0.6 Ensembl ENCODE 11.7 -73.2 -73223 2.4 PRDM6 SP7 PAF1 SCRT2 RNU6-1141P RNU6-306P MLLT10 HNRNPRP1 RF00026-123 NONHSAG005377.2 SKIDA1 DNAJC1
GH10J021714 Enhancer 0.6 Ensembl ENCODE 11.8 -151.1 -151065 1.9 ZNF24 RFX1 GATA2 RNU6-306P RNU6-1141P MLLT10 MIR1915 MIR1915HG HSALNG0076601 HSALNG0076603 SKIDA1 DNAJC1
GH10J021660 Enhancer 0.5 Ensembl 11.7 -97.5 -97524 3 PRDM6 ZNF18 MEIS2 ZNF366 PKNOX1 GFI1B HMBOX1 RNU6-1141P RF00026-123 RNU6-306P MLLT10 HSALNG0076599 NONHSAG005377.2 SKIDA1 DNAJC1
GH10J021649 Enhancer 0.5 Ensembl 12.4 -85.2 -85224 1.2 ATF2 ZIC2 RBM22 GATA2 PKNOX1 RNU6-306P MLLT10 RF00026-123 RNU6-1141P HSALNG0076599 HNRNPRP1 NONHSAG005377.2 SKIDA1 DNAJC1
GH10J021666 Enhancer 0.5 Ensembl 11.7 -102.4 -102424 0.8 ZBTB33 CHAMP1 ZBTB40 LARP7 ARID1B RNU6-306P MLLT10 HSALNG0076599 RF00026-123 RNU6-1141P NONHSAG005377.2 SKIDA1 DNAJC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU6-306P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNU6-306P Gene

Latest Assembly
chr10:21,564,471-21,564,577
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand

Previous Assembly
chr10:21,853,400-21,853,506
(GRCh37/hg19 by Entrez Gene)
Size:
107 bases
Orientation:
Minus strand

chr10:21,853,400-21,853,506
(GRCh37/hg19 by Ensembl)
Size:
107 bases
Orientation:
Minus strand

Genomic View for RNU6-306P Gene

Genes around RNU6-306P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-306P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-306P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-306P Gene

Proteins for RNU6-306P Gene

Post-translational modifications for RNU6-306P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-306P Gene

Domains & Families for RNU6-306P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU6-306P Gene

Function for RNU6-306P Gene

Phenotypes From GWAS Catalog for RNU6-306P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-306P Gene

Localization for RNU6-306P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-306P Gene

Pathways & Interactions for RNU6-306P Gene

PathCards logo

SuperPathways for RNU6-306P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU6-306P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU6-306P Gene

Drugs & Compounds for RNU6-306P Gene

No Compound Related Data Available

Transcripts for RNU6-306P Gene

mRNA/cDNA for RNU6-306P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-306P Gene

No ASD Table

Relevant External Links for RNU6-306P Gene

GeneLoc Exon Structure for
RNU6-306P

Expression for RNU6-306P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU6-306P Gene

genes like me logo Genes that share expression patterns with RNU6-306P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-306P Gene

Orthologs for RNU6-306P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-306P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia U6 30
  • 98 (a)
OneToOne
Dog
(Canis familiaris)
Mammalia U6 30
  • 79 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia U6 30
  • 77 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia U6 30
  • 76 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Gm22079 30
  • 75 (a)
OneToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia U6 30
  • 58 (a)
ManyToMany
Lizard
(Anolis carolinensis)
Reptilia U6 30
  • 75 (a)
OneToMany
Species where no ortholog for RNU6-306P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNU6-306P Gene

ENSEMBL:
Gene Tree for RNU6-306P (if available)
TreeFam:
Gene Tree for RNU6-306P (if available)
Alliance of Genome Resources:
Additional Orthologs for RNU6-306P

Paralogs for RNU6-306P Gene

No data available for Paralogs for RNU6-306P Gene

Variants for RNU6-306P Gene

Additional Variant Information for RNU6-306P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-306P
Leiden Open Variation Database (LOVD)
RNU6-306P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-306P Gene

Disorders for RNU6-306P Gene

No disorders were found for RNU6-306P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-306P Gene

Publications for RNU6-306P Gene

No publications were found for RNU6-306P Gene.

Products for RNU6-306P Gene

Sources for RNU6-306P Gene