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Aliases for RNU6-152P Gene

Subcategory (RNA class) for RNU6-152P Gene

snRNA

Aliases for RNU6-152P Gene

  • RNA, U6 Small Nuclear 152, Pseudogene 2 3 5

External Ids for RNU6-152P Gene

ORGUL Members for RNU6-152P Gene

Previous GeneCards Identifiers for RNU6-152P Gene

  • GC01P182301
  • GC00U934582

Summaries for RNU6-152P Gene

GeneCards Summary for RNU6-152P Gene

RNU6-152P (RNA, U6 Small Nuclear 152, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-152P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-152P Gene

Genomics for RNU6-152P Gene

GeneHancer (GH) Regulatory Elements for RNU6-152P Gene

Promoters and enhancers for RNU6-152P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I182299 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -26.1 -26076 3.7 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B YBX1 FEZF1 DMAP1 DHX9 HMGN1P4 LAMC1 GLUL RNU6-152P RPL18P2 EIF1P3 LINC01344 YPEL5P1
GH01I182288 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -36.1 -36134 5.3 HDGF PKNOX1 ATF1 FOXA2 MLX ARID4B FEZF1 ZNF48 ETS1 YY1 DHX9 LAMC1 RPL18P2 RNU6-152P GLUL HMGN1P4 LINC01344 YPEL5P1
GH01I182142 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -180.4 -180421 7.8 PKNOX1 FOXA2 ARNT YY1 ZNF143 DEK REST ZNF592 SMARCA4 GLIS1 GLUL TEDDM1 RPL18P2 RNU6-152P RGS16 RGSL1 RNASEL ENSG00000232309 GC01M182183 LINC01344
GH01I182257 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -67.8 -67825 3.3 PKNOX1 ATF1 NCOA2 ZNF280A TCF12 POLR2B ZNF766 CBX5 GATA2 ATF7 DHX9 GLUL LAMC1-AS1 TEDDM1 RNU6-152P RPL18P2 RNASEL LINC01344 YPEL5P1
GH01I182173 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -152.2 -152203 2.5 ELF3 PKNOX1 FOXA2 INSM2 KLF17 MZF1 FEZF1 GLI4 ZNF2 ZNF366 GLUL TEDDM1 RPL18P2 RNU6-152P RNASEL GC01M182183 ENSG00000232309 LINC01344
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-152P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-152P Gene

Genomic Locations for RNU6-152P Gene
chr1:182,327,068-182,327,174
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand

Genomic View for RNU6-152P Gene

Genes around RNU6-152P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-152P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-152P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-152P Gene

Proteins for RNU6-152P Gene

Post-translational modifications for RNU6-152P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-152P Gene

Domains & Families for RNU6-152P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-152P Gene

Function for RNU6-152P Gene

Phenotypes From GWAS Catalog for RNU6-152P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-152P Gene

Localization for RNU6-152P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-152P Gene

Pathways & Interactions for RNU6-152P Gene

SuperPathways for RNU6-152P Gene

No Data Available

Interacting Proteins for RNU6-152P Gene

Gene Ontology (GO) - Biological Process for RNU6-152P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-152P Gene

Drugs & Compounds for RNU6-152P Gene

No Compound Related Data Available

Transcripts for RNU6-152P Gene

mRNA/cDNA for RNU6-152P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-152P Gene

No ASD Table

Relevant External Links for RNU6-152P Gene

GeneLoc Exon Structure for
RNU6-152P
ECgene alternative splicing isoforms for
RNU6-152P

Expression for RNU6-152P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-152P Gene

genes like me logo Genes that share expression patterns with RNU6-152P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-152P Gene

Orthologs for RNU6-152P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-152P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 79 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U6 34
  • 76 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U6 34
  • 73 (a)
ManyToMany
Species where no ortholog for RNU6-152P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-152P Gene

ENSEMBL:
Gene Tree for RNU6-152P (if available)
TreeFam:
Gene Tree for RNU6-152P (if available)

Paralogs for RNU6-152P Gene

No data available for Paralogs for RNU6-152P Gene

Variants for RNU6-152P Gene

Additional Variant Information for RNU6-152P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-152P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-152P Gene

Disorders for RNU6-152P Gene

No disorders were found for RNU6-152P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-152P Gene

Publications for RNU6-152P Gene

No publications were found for RNU6-152P Gene.

Products for RNU6-152P Gene

Sources for RNU6-152P Gene

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