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Aliases for RNU5B-5P Gene

Aliases for RNU5B-5P Gene

  • RNA, U5B Small Nuclear 5, Pseudogene 2 3

External Ids for RNU5B-5P Gene

Previous GeneCards Identifiers for RNU5B-5P Gene

  • GC09U901009
  • GC09P128188
  • GC09P097800

Summaries for RNU5B-5P Gene

GeneCards Summary for RNU5B-5P Gene

RNU5B-5P (RNA, U5B Small Nuclear 5, Pseudogene) is a Pseudogene.

Additional gene information for RNU5B-5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5B-5P Gene

Genomics for RNU5B-5P Gene

GeneHancer (GH) Regulatory Elements for RNU5B-5P Gene

Promoters and enhancers for RNU5B-5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I125427 Enhancer 0.4 ENCODE 550.8 +1.9 1948 0.2 CTCF ZNF24 ZBTB33 RNU5B-5P RN7SL30P
GH09I125428 Enhancer 0.7 ENCODE 0.8 +2.4 2368 0.2 CTCF KLF1 RB1 ARID4B RAD21 CC2D1A GLIS2 ARID2 VEZF1 SMC3 RNU5B-5P RN7SL30P
GH09I125470 Enhancer 1.2 Ensembl ENCODE 0.2 +46.8 46806 4.1 PKNOX1 ATF1 FOXA2 ARNT FEZF1 NCOA2 TCF12 CBX5 ZNF213 GATA2 MAPKAP1 RN7SL30P RNU5B-5P
GH09I125446 Enhancer 0.7 ENCODE 0.3 +21.1 21129 1 HDGF PKNOX1 SMAD1 MAX EBF1 ATF7 IKZF2 RUNX3 SMARCA5 ZNF687 PBX3 RNU5B-5P RN7SL30P MAPKAP1
GH09I125460 Enhancer 0.7 ENCODE 0.3 +35.4 35446 1.5 NCOA3 PKNOX1 FOXA2 NEUROD1 MAX FEZF1 RAD21 YY1 CTBP1 GATA3 PBX3 RNU5B-5P RN7SL30P MAPKAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU5B-5P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU5B-5P Gene

Genomic Locations for RNU5B-5P Gene
chr9:125,425,789-125,425,876
(GRCh38/hg38)
Size:
88 bases
Orientation:
Plus strand
chr9:128,188,068-128,188,155
(GRCh37/hg19)

Genomic View for RNU5B-5P Gene

Genes around RNU5B-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU5B-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU5B-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5B-5P Gene

Proteins for RNU5B-5P Gene

Post-translational modifications for RNU5B-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5B-5P Gene

Domains & Families for RNU5B-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5B-5P Gene

Function for RNU5B-5P Gene

Phenotypes From GWAS Catalog for RNU5B-5P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU5B-5P Gene

Localization for RNU5B-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU5B-5P Gene

Pathways & Interactions for RNU5B-5P Gene

SuperPathways for RNU5B-5P Gene

No Data Available

Interacting Proteins for RNU5B-5P Gene

Gene Ontology (GO) - Biological Process for RNU5B-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU5B-5P Gene

Drugs & Compounds for RNU5B-5P Gene

No Compound Related Data Available

Transcripts for RNU5B-5P Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5B-5P Gene

No ASD Table

Relevant External Links for RNU5B-5P Gene

GeneLoc Exon Structure for
RNU5B-5P
ECgene alternative splicing isoforms for
RNU5B-5P

No data available for mRNA/cDNA for RNU5B-5P Gene

Expression for RNU5B-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU5B-5P Gene

Orthologs for RNU5B-5P Gene

No data available for Orthologs and Evolution for RNU5B-5P Gene

Paralogs for RNU5B-5P Gene

No data available for Paralogs for RNU5B-5P Gene

Variants for RNU5B-5P Gene

Additional Variant Information for RNU5B-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU5B-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU5B-5P Gene

Disorders for RNU5B-5P Gene

No disorders were found for RNU5B-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU5B-5P Gene

Publications for RNU5B-5P Gene

No publications were found for RNU5B-5P Gene.

Products for RNU5B-5P Gene

Sources for RNU5B-5P Gene

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