Aliases for RNU4-24P Gene

Aliases for RNU4-24P Gene

  • RNA, U4 Small Nuclear 24, Pseudogene 2 3 5

External Ids for RNU4-24P Gene

Previous GeneCards Identifiers for RNU4-24P Gene

  • GC12M096699

Summaries for RNU4-24P Gene

GeneCards Summary for RNU4-24P Gene

RNU4-24P (RNA, U4 Small Nuclear 24, Pseudogene) is a Pseudogene.

Additional gene information for RNU4-24P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU4-24P Gene

Genomics for RNU4-24P Gene

GeneHancer (GH) Regulatory Elements for RNU4-24P Gene

Promoters and enhancers for RNU4-24P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J096302 Enhancer 0.3 Ensembl 750.6 +0.0 12 2.2 RAD21 RF00015-018 RNU4-24P CDK17 CFAP54 lnc-LTA4H-6
GH12J096304 Enhancer 0.2 Ensembl 750.6 -1.4 -1388 0.2 RF00015-018 RNU4-24P CDK17 CFAP54 piR-45012-127
GH12J096396 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.6 -95.8 -95829 6.3 ZNF785 ZNF24 ZBTB40 CTCF SMARCE1 POLR2A TCF7L2 CTBP1 MIXL1 ZNF362 CDK17 lnc-CFAP54-4 CFAP54 USP44 RNU4-24P METAP2 lnc-LTA4H-7 ENSG00000257169
GH12J096253 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.5 +46.8 46752 5.7 POLR2A NR2F6 ATF1 MIXL1 RERE SP1 CEBPG ZNF644 PKNOX1 ZIC2 CDK17 RNU4-24P CFAP54 ENSG00000257878 ELK3 RF00994-255 HSALNG0093292
GH12J096263 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.6 +39.8 39812 1.8 FOXA1 MLX RBPJ NR2F6 CREB1 MIXL1 RAD21 TEAD4 RERE ELF3 RNU4-24P CDK17 CFAP54 LTA4H HSALNG0093292 RF00994-255 ELK3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU4-24P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU4-24P Gene

Genomic Locations for RNU4-24P Gene
chr12:96,303,375-96,303,513
(GRCh38/hg38)
Size:
139 bases
Orientation:
Minus strand
chr12:96,697,153-96,697,291
(GRCh37/hg19)
Size:
139 bases
Orientation:
Minus strand

Genomic View for RNU4-24P Gene

Genes around RNU4-24P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-24P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-24P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU4-24P Gene

Proteins for RNU4-24P Gene

Post-translational modifications for RNU4-24P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-24P Gene

Domains & Families for RNU4-24P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU4-24P Gene

Function for RNU4-24P Gene

Phenotypes From GWAS Catalog for RNU4-24P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-24P Gene

Localization for RNU4-24P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU4-24P Gene

Pathways & Interactions for RNU4-24P Gene

PathCards logo

SuperPathways for RNU4-24P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU4-24P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU4-24P Gene

Drugs & Compounds for RNU4-24P Gene

No Compound Related Data Available

Transcripts for RNU4-24P Gene

mRNA/cDNA for RNU4-24P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-24P Gene

No ASD Table

Relevant External Links for RNU4-24P Gene

GeneLoc Exon Structure for
RNU4-24P
ECgene alternative splicing isoforms for
RNU4-24P

Expression for RNU4-24P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU4-24P Gene

genes like me logo Genes that share expression patterns with RNU4-24P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU4-24P Gene

Orthologs for RNU4-24P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU4-24P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U4 33
  • 99 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U4 33
  • 60 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii U4 33
  • 65 (a)
ManyToMany
Species where no ortholog for RNU4-24P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU4-24P Gene

ENSEMBL:
Gene Tree for RNU4-24P (if available)
TreeFam:
Gene Tree for RNU4-24P (if available)

Paralogs for RNU4-24P Gene

No data available for Paralogs for RNU4-24P Gene

Variants for RNU4-24P Gene

Additional Variant Information for RNU4-24P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU4-24P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-24P Gene

Disorders for RNU4-24P Gene

No disorders were found for RNU4-24P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-24P Gene

Publications for RNU4-24P Gene

No publications were found for RNU4-24P Gene.

No data available for External Links for RNU4-24P Gene

Products for RNU4-24P Gene

Sources for RNU4-24P Gene