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Aliases for RNU4-22P Gene

Aliases for RNU4-22P Gene

  • RNA, U4 Small Nuclear 22, Pseudogene 2 3 5

External Ids for RNU4-22P Gene

Previous GeneCards Identifiers for RNU4-22P Gene

  • GC14P088980

Summaries for RNU4-22P Gene

GeneCards Summary for RNU4-22P Gene

RNU4-22P (RNA, U4 Small Nuclear 22, Pseudogene) is a Pseudogene.

Additional gene information for RNU4-22P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU4-22P Gene

Genomics for RNU4-22P Gene

GeneHancer (GH) Regulatory Elements for RNU4-22P Gene

Promoters and enhancers for RNU4-22P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I088467 Enhancer 0.6 ENCODE 18.1 -44.6 -44597 2.3 SMARCE1 NCOA3 GATAD2B DPF2 FOXA1 JUND GATA3 CUX1 FOS FOSL2 RNU4-22P SPATA7 LOC105370614 PTPN21 GC14M092125
GH14I088487 Enhancer 0.5 ENCODE 18.2 -24.9 -24919 2.8 E2F1 ZFHX2 GATA3 ZFP36 CUX1 TCF7L2 EGR2 SPATA7 RNU4-22P PTPN21 LOC105370614 GC14M092125
GH14I088830 Enhancer 0.6 ENCODE 12 +317.6 317552 2.7 BACH1 MAFG ZNF316 JUND ZNF184 NFE2 MAFK EMSY NFE2L2 RNU4-22P EML5 LOC105370614 SPATA7 GC14P088843 TTC8 GC14M092125
GH14I089388 Enhancer 1.3 Ensembl ENCODE dbSUPER 4.3 +877.1 877099 4.4 ELF3 FOXA2 MLX ARID4B DMAP1 RAD21 RARA ETS1 SLC30A9 FOS FOXN3 RNU4-22P LOC105370614 ENSG00000258380 ENSG00000258699
GH14I088930 Enhancer 0.4 ENCODE 6 +419.7 419729 4.5 RFX1 MNT BMI1 RNU4-22P GC14P088982 GC14M092125
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU4-22P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU4-22P Gene

Genomic Locations for RNU4-22P Gene
chr14:88,513,498-88,513,663
(GRCh38/hg38)
Size:
166 bases
Orientation:
Plus strand
chr14:88,979,842-88,980,007
(GRCh37/hg19)

Genomic View for RNU4-22P Gene

Genes around RNU4-22P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-22P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-22P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU4-22P Gene

Proteins for RNU4-22P Gene

Post-translational modifications for RNU4-22P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-22P Gene

Domains & Families for RNU4-22P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU4-22P Gene

Function for RNU4-22P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-22P Gene

Localization for RNU4-22P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU4-22P Gene

Pathways & Interactions for RNU4-22P Gene

SuperPathways for RNU4-22P Gene

No Data Available

Interacting Proteins for RNU4-22P Gene

Gene Ontology (GO) - Biological Process for RNU4-22P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU4-22P Gene

Drugs & Compounds for RNU4-22P Gene

No Compound Related Data Available

Transcripts for RNU4-22P Gene

mRNA/cDNA for RNU4-22P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-22P Gene

No ASD Table

Relevant External Links for RNU4-22P Gene

GeneLoc Exon Structure for
RNU4-22P
ECgene alternative splicing isoforms for
RNU4-22P

Expression for RNU4-22P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU4-22P Gene

mRNA differential expression in normal tissues according to GTEx for RNU4-22P Gene

This gene is overexpressed in Ovary (x4.1).
genes like me logo Genes that share expression patterns with RNU4-22P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU4-22P Gene

Orthologs for RNU4-22P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU4-22P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U4 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U4 34
  • 69 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm25279 34
  • 56 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U4 34
  • 44 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U4 34
  • 43 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U4 34
  • 69 (a)
OneToMany
Species where no ortholog for RNU4-22P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU4-22P Gene

ENSEMBL:
Gene Tree for RNU4-22P (if available)
TreeFam:
Gene Tree for RNU4-22P (if available)

Paralogs for RNU4-22P Gene

No data available for Paralogs for RNU4-22P Gene

Variants for RNU4-22P Gene

Additional Variant Information for RNU4-22P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU4-22P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-22P Gene

Disorders for RNU4-22P Gene

No disorders were found for RNU4-22P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-22P Gene

Publications for RNU4-22P Gene

No publications were found for RNU4-22P Gene.

Products for RNU4-22P Gene

Sources for RNU4-22P Gene

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