Aliases for RNU2-69P Gene

Aliases for RNU2-69P Gene

  • RNA, U2 Small Nuclear 69, Pseudogene 2 3 5

External Ids for RNU2-69P Gene

Previous GeneCards Identifiers for RNU2-69P Gene

  • GC18M056594
  • GC00U935951

Summaries for RNU2-69P Gene

GeneCards Summary for RNU2-69P Gene

RNU2-69P (RNA, U2 Small Nuclear 69, Pseudogene) is a Pseudogene.

Additional gene information for RNU2-69P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU2-69P Gene

Genomics for RNU2-69P Gene

GeneHancer (GH) Regulatory Elements for RNU2-69P Gene

Promoters and enhancers for RNU2-69P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J058926 Enhancer 0.2 Ensembl 750.6 +0.1 95 0.4 RF00004-059 RNU2-69P ALPK2 piR-46571-001 ZNF532
GH18J059022 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 11 -96.4 -96404 3 FOXA1 SP1 RXRA FOXA2 JUND YY1 RCOR1 NR2F2 GATA3 RAD21 ENSG00000199713 RNU2-69P HSALNG0121844 HSALNG0121843 OACYLP
GH18J058953 Promoter/Enhancer 0.9 EPDnew Ensembl 12.4 -27.0 -27005 0.6 GATAD2A SOX13 ATF3 SP1 FOXA1 FOXA2 TEAD1 FOXP1 GATA3 JUND ZNF532 RNU2-69P HSALNG0121841 piR-43105-302
GH18J058886 Enhancer 0.9 ENCODE CraniofacialAtlas dbSUPER 11.5 +38.9 38878 1.8 IKZF1 IKZF2 ETV6 CBFB DPF2 EED RUNX3 GABPA GATA3 POLR2A RNU2-69P ENSG00000199713 HSALNG0121839 ZNF532
GH18J058974 Enhancer 0.8 Ensembl ENCODE dbSUPER 11.2 -49.6 -49605 2.2 IKZF1 IKZF2 POLR2A RUNX3 RNU2-69P piR-43105-302 OACYLP ZNF532
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU2-69P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-69P Gene

Genomic Locations for RNU2-69P Gene
chr18:58,926,197-58,926,296
(GRCh38/hg38)
Size:
100 bases
Orientation:
Minus strand

Genomic View for RNU2-69P Gene

Genes around RNU2-69P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-69P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-69P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-69P Gene

Proteins for RNU2-69P Gene

Post-translational modifications for RNU2-69P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-69P Gene

Domains & Families for RNU2-69P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU2-69P Gene

Function for RNU2-69P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-69P Gene

Localization for RNU2-69P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-69P Gene

Pathways & Interactions for RNU2-69P Gene

PathCards logo

SuperPathways for RNU2-69P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU2-69P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-69P Gene

Drugs & Compounds for RNU2-69P Gene

No Compound Related Data Available

Transcripts for RNU2-69P Gene

mRNA/cDNA for RNU2-69P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-69P Gene

No ASD Table

Relevant External Links for RNU2-69P Gene

GeneLoc Exon Structure for
RNU2-69P
ECgene alternative splicing isoforms for
RNU2-69P

Expression for RNU2-69P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU2-69P Gene

genes like me logo Genes that share expression patterns with RNU2-69P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-69P Gene

Orthologs for RNU2-69P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-69P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U2 33
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22850 33
  • 57 (a)
OneToMany
dog
(Canis familiaris)
Mammalia U2 33
  • 55 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U2 33
  • 44 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U2 33
  • 36 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U2 33
  • 30 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U2 33
  • 29 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U2 33
  • 32 (a)
ManyToMany
Species where no ortholog for RNU2-69P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU2-69P Gene

ENSEMBL:
Gene Tree for RNU2-69P (if available)
TreeFam:
Gene Tree for RNU2-69P (if available)

Paralogs for RNU2-69P Gene

No data available for Paralogs for RNU2-69P Gene

Variants for RNU2-69P Gene

Additional Variant Information for RNU2-69P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-69P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-69P Gene

Disorders for RNU2-69P Gene

No disorders were found for RNU2-69P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-69P Gene

Publications for RNU2-69P Gene

No publications were found for RNU2-69P Gene.

Products for RNU2-69P Gene

Sources for RNU2-69P Gene