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Aliases for RNU2-65P Gene

Subcategory (RNA class) for RNU2-65P Gene

snRNA

Aliases for RNU2-65P Gene

  • RNA, U2 Small Nuclear 65, Pseudogene 2 3 5

External Ids for RNU2-65P Gene

ORGUL Members for RNU2-65P Gene

Previous GeneCards Identifiers for RNU2-65P Gene

  • GC15P072342
  • GC00U936153

Summaries for RNU2-65P Gene

GeneCards Summary for RNU2-65P Gene

RNU2-65P (RNA, U2 Small Nuclear 65, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU2-65P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU2-65P Gene

Genomics for RNU2-65P Gene

GeneHancer (GH) Regulatory Elements for RNU2-65P Gene

Promoters and enhancers for RNU2-65P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I072044 Enhancer 0.2 FANTOM5 550.8 -0.3 -266 0 GC15P072046 RNU2-65P SENP8 CELF6 MYO9A EIF5A2P1
GH15I072103 Enhancer 0.9 Ensembl ENCODE 10.1 +58.1 58118 0.6 HDGF SUZ12 ZKSCAN1 ZNF354C POLR2A ZNF169 ZNF600 ZNF444 ZNF10 ZSCAN21 MYO9A RPL17P39 HEXA LOC105370887 RNU2-65P ENSG00000261187 BBS4 SENP8
GH15I072175 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 10 +131.2 131167 0.9 ZNF121 ZNF362 KLF16 TAL1 CBFA2T3 ZNF24 GRAMD2A PKM RNU2-65P BBS4 ENSG00000260173 GC15M072170
GH15I072167 Enhancer 0.9 ENCODE dbSUPER 9.9 +124.1 124115 4 HDGF PKNOX1 NFIB TEAD4 TAL1 ZIC2 TCF12 CTBP1 GATA3 EZH2 PKM GRAMD2A RNU2-65P MYO9A ENSG00000260173 GC15M072170
GH15I072057 Enhancer 0.8 Ensembl ENCODE 0.4 +12.8 12845 1 IRF2 MAFG OSR2 PRDM6 ZSCAN5C ZNF600 EMSY MAFK ZBTB17 SENP8 MYO9A RNU2-65P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU2-65P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-65P Gene

Genomic Locations for RNU2-65P Gene
chr15:72,045,183-72,045,367
(GRCh38/hg38)
Size:
185 bases
Orientation:
Plus strand

Genomic View for RNU2-65P Gene

Genes around RNU2-65P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-65P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-65P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-65P Gene

Proteins for RNU2-65P Gene

Post-translational modifications for RNU2-65P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-65P Gene

Domains & Families for RNU2-65P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU2-65P Gene

Function for RNU2-65P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-65P Gene

Localization for RNU2-65P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-65P Gene

Pathways & Interactions for RNU2-65P Gene

SuperPathways for RNU2-65P Gene

No Data Available

Interacting Proteins for RNU2-65P Gene

Gene Ontology (GO) - Biological Process for RNU2-65P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-65P Gene

Drugs & Compounds for RNU2-65P Gene

No Compound Related Data Available

Transcripts for RNU2-65P Gene

mRNA/cDNA for RNU2-65P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-65P Gene

No ASD Table

Relevant External Links for RNU2-65P Gene

GeneLoc Exon Structure for
RNU2-65P
ECgene alternative splicing isoforms for
RNU2-65P

Expression for RNU2-65P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU2-65P Gene

genes like me logo Genes that share expression patterns with RNU2-65P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-65P Gene

Orthologs for RNU2-65P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-65P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U2 34
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U2 34
  • 60 (a)
OneToMany
cow
(Bos Taurus)
Mammalia U2 34
  • 55 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U2 34
  • 53 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U2 34
  • 53 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm23206 34
  • 51 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U2 34
  • 49 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U2 34
  • 47 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea U2 34 34 34 34
  • 46 (a)
ManyToMany
Species where no ortholog for RNU2-65P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU2-65P Gene

ENSEMBL:
Gene Tree for RNU2-65P (if available)
TreeFam:
Gene Tree for RNU2-65P (if available)

Paralogs for RNU2-65P Gene

No data available for Paralogs for RNU2-65P Gene

Variants for RNU2-65P Gene

Additional Variant Information for RNU2-65P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-65P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-65P Gene

Disorders for RNU2-65P Gene

No disorders were found for RNU2-65P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-65P Gene

Publications for RNU2-65P Gene

No publications were found for RNU2-65P Gene.

Products for RNU2-65P Gene

Sources for RNU2-65P Gene

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