Aliases for RNU2-33P Gene

Aliases for RNU2-33P Gene

  • RNA, U2 Small Nuclear 33, Pseudogene 2 3 5
  • RNU2-33P 5

External Ids for RNU2-33P Gene

Previous GeneCards Identifiers for RNU2-33P Gene

  • GC14P096852
  • GC00U935434

Summaries for RNU2-33P Gene

GeneCards Summary for RNU2-33P Gene

RNU2-33P (RNA, U2 Small Nuclear 33, Pseudogene) is a Pseudogene.

Additional gene information for RNU2-33P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU2-33P Gene

Genomics for RNU2-33P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNU2-33P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J096424 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 11.1 +39.6 39613 0.9 ZNF217 CTCF ELF1 REST CUX1 TRIM22 SMC3 GABPB1 RAD21 SIN3A PEBP1P1 lnc-ATG2B-14 AK7 RNU2-33P GSKIP PAPOLA
GH14J096409 Enhancer 0.8 Ensembl ENCODE 11.7 +25.1 25053 0.6 FOXA2 FOSL1 JUND NFE2 SOX5 HDAC2 HMG20A NR2F6 ESRRA HDAC1 RNU2-33P GSKIP PAPOLA HSALNG0103504 lnc-ATG2B-14 AK7
GH14J096405 Enhancer 0.6 Ensembl 11.9 +21.7 21677 2.2 MYNN ZNF316 PRDM10 NFE2 RAD51 MAFG ZNF384 MAFF ATF4 ARID1B RNU2-33P GSKIP ATG2B PAPOLA HSALNG0103504 AK7 lnc-ATG2B-14
GH14J096445 Enhancer 0.6 ENCODE 10 +61.5 61538 0.7 TAL1 TCF12 CEBPG TEAD4 ARID1B CEBPB DPF2 ATF1 CBFA2T2 KLF16 PAPOLA RNU2-33P GSKIP HSALNG0103505 lnc-ATG2B-6 AK7
GH14J096307 Enhancer 0.6 ENCODE 10.5 -74.9 -74881 3.9 CTCF RXRA FOXA2 RAD21 HNF4A REST MAX SP1 TAF1 YY1 GSKIP RNU2-33P PAPOLA HSALNG0103496 lnc-TCL1A-7 ATG2B BDKRB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU2-33P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNU2-33P Gene

Latest Assembly
chr14:96,384,624-96,384,815
(GRCh38/hg38)
Size:
192 bases
Orientation:
Plus strand

Previous Assembly
chr14:96,850,961-96,851,149
(GRCh37/hg19 by Entrez Gene)
Size:
189 bases
Orientation:
Plus strand

chr14:96,850,961-96,851,152
(GRCh37/hg19 by Ensembl)
Size:
192 bases
Orientation:
Plus strand

Genomic View for RNU2-33P Gene

Genes around RNU2-33P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-33P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-33P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-33P Gene

Proteins for RNU2-33P Gene

Post-translational modifications for RNU2-33P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-33P Gene

Domains & Families for RNU2-33P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU2-33P Gene

Function for RNU2-33P Gene

Phenotypes From GWAS Catalog for RNU2-33P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-33P Gene

Localization for RNU2-33P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-33P Gene

Pathways & Interactions for RNU2-33P Gene

PathCards logo

SuperPathways for RNU2-33P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU2-33P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU2-33P Gene

Drugs & Compounds for RNU2-33P Gene

No Compound Related Data Available

Transcripts for RNU2-33P Gene

mRNA/cDNA for RNU2-33P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-33P Gene

No ASD Table

Relevant External Links for RNU2-33P Gene

GeneLoc Exon Structure for
RNU2-33P

Expression for RNU2-33P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU2-33P Gene

genes like me logo Genes that share expression patterns with RNU2-33P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-33P Gene

Orthologs for RNU2-33P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-33P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia U2 31
  • 99 (a)
OneToOne
Cow
(Bos Taurus)
Mammalia U2 31
  • 79 (a)
OneToMany
Dog
(Canis familiaris)
Mammalia U2 31
  • 78 (a)
ManyToMany
Lizard
(Anolis carolinensis)
Reptilia U2 31 31
  • 77 (a)
ManyToMany
Species where no ortholog for RNU2-33P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNU2-33P Gene

ENSEMBL:
Gene Tree for RNU2-33P (if available)
TreeFam:
Gene Tree for RNU2-33P (if available)

Paralogs for RNU2-33P Gene

No data available for Paralogs for RNU2-33P Gene

Variants for RNU2-33P Gene

Additional Variant Information for RNU2-33P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-33P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-33P Gene

Disorders for RNU2-33P Gene

No disorders were found for RNU2-33P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-33P Gene

Publications for RNU2-33P Gene

No publications were found for RNU2-33P Gene.

Products for RNU2-33P Gene

Sources for RNU2-33P Gene