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Aliases for RNU2-22P Gene

Subcategory (RNA class) for RNU2-22P Gene

snRNA

Aliases for RNU2-22P Gene

  • RNA, U2 Small Nuclear 22, Pseudogene 2 3 5

External Ids for RNU2-22P Gene

ORGUL Members for RNU2-22P Gene

Previous GeneCards Identifiers for RNU2-22P Gene

  • GC02M232365
  • GC00U936086

Summaries for RNU2-22P Gene

GeneCards Summary for RNU2-22P Gene

RNU2-22P (RNA, U2 Small Nuclear 22, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU2-22P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU2-22P Gene

Genomics for RNU2-22P Gene

GeneHancer (GH) Regulatory Elements for RNU2-22P Gene

Promoters and enhancers for RNU2-22P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J231501 Enhancer 0.2 Ensembl 600.7 +0.3 300 0.2 GC02M231529 PIR44442 RNU2-22P GC02P231502 GC02P231501 ENSG00000283491
GH02J231462 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +37.7 37745 3.9 SP1 ZFX ELF3 MNT ZNF148 NKRF POLR2A MLLT1 CEBPG RERE NCL DIS3L2 RPL28P2 ENSG00000251485 COPS7B ENSG00000235419 NMUR1 RNU2-22P ENSG00000224376 LINC00471
GH02J231639 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -140.3 -140274 6.3 ZNF384 ZNF687 NCOA3 RELA IKZF1 ZBTB33 RFX1 IKZF2 LARP7 SP1 RNU2-22P LINC00471 RN7SL499P LOC105373928
GH02J231407 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.2 +90.8 90752 9.3 SP1 ELF3 CTCF CEBPG ZNF687 TFE3 PPARG CREM RAD21 KAT8 B3GNT7 ARMC9 ENSG00000233538 SNORA75 SNORD20 NCL HTR2B RNU2-22P PSMD1 ENSG00000224376
GH02J231597 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.5 -95.2 -95211 1.6 NKRF ZNF687 CREM MLLT1 IKZF1 BACH1 IKZF2 ZNF143 TRIM22 ZSCAN29 TEX44 NMUR1 RNU2-22P LINC00471 GC02M231602
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU2-22P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-22P Gene

Genomic Locations for RNU2-22P Gene
chr2:231,501,990-231,502,201
(GRCh38/hg38)
Size:
212 bases
Orientation:
Minus strand

Genomic View for RNU2-22P Gene

Genes around RNU2-22P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-22P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-22P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-22P Gene

Proteins for RNU2-22P Gene

Post-translational modifications for RNU2-22P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-22P Gene

Domains & Families for RNU2-22P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU2-22P Gene

Function for RNU2-22P Gene

Phenotypes From GWAS Catalog for RNU2-22P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-22P Gene

Localization for RNU2-22P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-22P Gene

Pathways & Interactions for RNU2-22P Gene

PathCards logo

SuperPathways for RNU2-22P Gene

No Data Available

Interacting Proteins for RNU2-22P Gene

Gene Ontology (GO) - Biological Process for RNU2-22P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-22P Gene

Drugs & Compounds for RNU2-22P Gene

No Compound Related Data Available

Transcripts for RNU2-22P Gene

mRNA/cDNA for RNU2-22P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-22P Gene

No ASD Table

Relevant External Links for RNU2-22P Gene

GeneLoc Exon Structure for
RNU2-22P
ECgene alternative splicing isoforms for
RNU2-22P

Expression for RNU2-22P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-22P Gene

Orthologs for RNU2-22P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-22P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U2 35
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U2 35
  • 64 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25007 35
  • 57 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U2 35
  • 49 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U2 35
  • 47 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U2 35
  • 46 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U2 35
  • 51 (a)
ManyToMany
Species where no ortholog for RNU2-22P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU2-22P Gene

ENSEMBL:
Gene Tree for RNU2-22P (if available)
TreeFam:
Gene Tree for RNU2-22P (if available)

Paralogs for RNU2-22P Gene

No data available for Paralogs for RNU2-22P Gene

Variants for RNU2-22P Gene

Additional Variant Information for RNU2-22P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-22P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-22P Gene

Disorders for RNU2-22P Gene

No disorders were found for RNU2-22P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-22P Gene

Publications for RNU2-22P Gene

No publications were found for RNU2-22P Gene.

No data available for External Links for RNU2-22P Gene

Products for RNU2-22P Gene

Sources for RNU2-22P Gene

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