Aliases for RNU2-19P Gene

Aliases for RNU2-19P Gene

  • RNA, U2 Small Nuclear 19, Pseudogene 2 3 5

External Ids for RNU2-19P Gene

Previous GeneCards Identifiers for RNU2-19P Gene

  • GC01P205537
  • GC00U934583

Summaries for RNU2-19P Gene

GeneCards Summary for RNU2-19P Gene

RNU2-19P (RNA, U2 Small Nuclear 19, Pseudogene) is a Pseudogene.

Additional gene information for RNU2-19P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU2-19P Gene

Genomics for RNU2-19P Gene

GeneHancer (GH) Regulatory Elements for RNU2-19P Gene

Promoters and enhancers for RNU2-19P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J205567 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 750.6 +1.7 1682 2.7 CTCF GLIS2 ZIC2 ZBTB8A ATF7 SP2 EZH2 ZNF10 ZNF423 ZNF18 MFSD4A MFSD4A-AS1 RF00004-009 RNU2-19P ELK4
GH01J205565 Enhancer 0.7 ENCODE dbSUPER 750.6 -0.8 -791 1.1 TCF7L2 ZNF121 PRDM1 PRDM10 CTBP1 HES1 NFIB GATA3 JUND FOXA1 RF00004-009 RNU2-19P ELK4 MFSD4A NUCKS1 MFSD4A-AS1 RF00017-455
GH01J205543 Promoter/Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 12.1 -22.8 -22821 1.6 POLR2A ZNF217 MNT PRDM1 GLIS2 CREB1 PRDM10 BRCA1 CTBP1 ZNF629 MFSD4A RNU2-19P CDK18 RNU6-418P LOC100420878 ELK4 RF00017-455 RF00004-009 MFSD4A-AS1
GH01J205647 Enhancer 1 Ensembl dbSUPER 11.1 +82.0 81985 1.8 ZNF121 SP7 ZSCAN21 IKZF1 GLIS2 PKNOX1 ZIC2 PRDM10 ZEB2 ZNF629 RNU6-418P SLC45A3 MFSD4A RNU2-19P CDK18 NUCKS1 ELK4 LOC105371701
GH01J205609 Enhancer 0.9 Ensembl ENCODE dbSUPER 10.6 +44.1 44085 2.8 MAFK ZSCAN4 POLR2A ZNF316 SCRT2 MAFG ZNF217 GATA3 JUND JUN lnc-SLC45A3-3 lnc-SLC45A3-4 SLC45A3 MFSD4A RNU2-19P CDK18 RAB29 NUCKS1 ELK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU2-19P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-19P Gene

Genomic Locations for RNU2-19P Gene
chr1:205,566,716-205,566,799
(GRCh38/hg38)
Size:
84 bases
Orientation:
Plus strand

Genomic View for RNU2-19P Gene

Genes around RNU2-19P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-19P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-19P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-19P Gene

Proteins for RNU2-19P Gene

Post-translational modifications for RNU2-19P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-19P Gene

Domains & Families for RNU2-19P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU2-19P Gene

Function for RNU2-19P Gene

Phenotypes From GWAS Catalog for RNU2-19P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-19P Gene

Localization for RNU2-19P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-19P Gene

Pathways & Interactions for RNU2-19P Gene

PathCards logo

SuperPathways for RNU2-19P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU2-19P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-19P Gene

Drugs & Compounds for RNU2-19P Gene

No Compound Related Data Available

Transcripts for RNU2-19P Gene

mRNA/cDNA for RNU2-19P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-19P Gene

No ASD Table

Relevant External Links for RNU2-19P Gene

GeneLoc Exon Structure for
RNU2-19P
ECgene alternative splicing isoforms for
RNU2-19P

Expression for RNU2-19P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU2-19P Gene

genes like me logo Genes that share expression patterns with RNU2-19P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-19P Gene

Orthologs for RNU2-19P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-19P Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia U2 33
  • 55 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U2 33 33
  • 46 (a)
OneToMany
cow
(Bos Taurus)
Mammalia U2 33
  • 43 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25475 33
  • 30 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia U2 33
  • 26 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U2 33
  • 44 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U2 33
  • 38 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii U2 33
  • 45 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea U2 33 33 33 33
  • 5 (a)
ManyToMany
Species where no ortholog for RNU2-19P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU2-19P Gene

ENSEMBL:
Gene Tree for RNU2-19P (if available)
TreeFam:
Gene Tree for RNU2-19P (if available)

Paralogs for RNU2-19P Gene

No data available for Paralogs for RNU2-19P Gene

Variants for RNU2-19P Gene

Additional Variant Information for RNU2-19P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-19P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-19P Gene

Disorders for RNU2-19P Gene

No disorders were found for RNU2-19P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-19P Gene

Publications for RNU2-19P Gene

No publications were found for RNU2-19P Gene.

No data available for External Links for RNU2-19P Gene

Products for RNU2-19P Gene

Sources for RNU2-19P Gene