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Aliases for RNU1-7P Gene

Subcategory (RNA class) for RNU1-7P Gene

snRNA

Aliases for RNU1-7P Gene

  • RNA, U1 Small Nuclear 7, Pseudogene 2 3 5
  • RNA, U1 Small Nuclear 7 2
  • RNU1-7 3

External Ids for RNU1-7P Gene

ORGUL Members for RNU1-7P Gene

Previous HGNC Symbols for RNU1-7P Gene

  • RNU1-7

Previous GeneCards Identifiers for RNU1-7P Gene

  • GC01M008268
  • GC00U934610

Summaries for RNU1-7P Gene

GeneCards Summary for RNU1-7P Gene

RNU1-7P (RNA, U1 Small Nuclear 7, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU1-7P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-7P Gene

Genomics for RNU1-7P Gene

GeneHancer (GH) Regulatory Elements for RNU1-7P Gene

Promoters and enhancers for RNU1-7P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I008180 Enhancer 1.4 Ensembl ENCODE dbSUPER 12.4 +23.4 23367 5 PKNOX1 CLOCK FOXA2 MLX ARID4B BRCA1 ETS1 FOS RUNX3 ZHX2 ERRFI1 RNU1-7P ENSG00000238290 SLC45A1 LOC100129776 RPL7AP18
GH01I008002 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.6 +201.6 201636 4.3 HDGF PKNOX1 FOXA2 ARNT ZFP64 SIN3A FEZF1 ZNF2 YY1 FOS ENSG00000238290 PARK7 ERRFI1 SLC45A1 LINC01714 RNU1-7P TNFRSF9 UTS2 PER3 GC01P008012
GH01I008199 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +3.2 3161 8.2 ATF1 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 FOS ATF7 LINC01714 ERRFI1 ENSG00000238290 SLC45A1 GC01M008206 RNU1-7P
GH01I008209 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.3 -5337 4.1 PKNOX1 SMAD1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ERRFI1 ENSG00000238290 SLC45A1 GC01M008206 LINC01714 RNU1-7P ENSG00000233645
GH01I008214 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -10.0 -10011 4.2 HDAC1 ATF1 ZFP64 BACH1 CEBPG ZNF48 ZBTB40 IRF9 CTBP1 ATF7 ENSG00000238290 ERRFI1 SLC45A1 ENSG00000233645 LINC01714 RNU1-7P GC01M008206
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU1-7P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU1-7P Gene

Genomic Locations for RNU1-7P Gene
chr1:8,206,434-8,206,597
(GRCh38/hg38)
Size:
164 bases
Orientation:
Minus strand

Genomic View for RNU1-7P Gene

Genes around RNU1-7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-7P Gene

Proteins for RNU1-7P Gene

Post-translational modifications for RNU1-7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-7P Gene

Domains & Families for RNU1-7P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-7P Gene

Function for RNU1-7P Gene

Phenotypes From GWAS Catalog for RNU1-7P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-7P Gene

Localization for RNU1-7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU1-7P Gene

Pathways & Interactions for RNU1-7P Gene

SuperPathways for RNU1-7P Gene

No Data Available

Interacting Proteins for RNU1-7P Gene

Gene Ontology (GO) - Biological Process for RNU1-7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU1-7P Gene

Drugs & Compounds for RNU1-7P Gene

No Compound Related Data Available

Transcripts for RNU1-7P Gene

mRNA/cDNA for RNU1-7P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-7P Gene

No ASD Table

Relevant External Links for RNU1-7P Gene

GeneLoc Exon Structure for
RNU1-7P
ECgene alternative splicing isoforms for
RNU1-7P

Expression for RNU1-7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU1-7P Gene

genes like me logo Genes that share expression patterns with RNU1-7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU1-7P Gene

Orthologs for RNU1-7P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for RNU1-7P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U1 34
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25704 34
  • 73 (a)
OneToMany
Species where no ortholog for RNU1-7P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU1-7P Gene

ENSEMBL:
Gene Tree for RNU1-7P (if available)
TreeFam:
Gene Tree for RNU1-7P (if available)

Paralogs for RNU1-7P Gene

No data available for Paralogs for RNU1-7P Gene

Variants for RNU1-7P Gene

Additional Variant Information for RNU1-7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-7P Gene

Disorders for RNU1-7P Gene

No disorders were found for RNU1-7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-7P Gene

Publications for RNU1-7P Gene

No publications were found for RNU1-7P Gene.

Products for RNU1-7P Gene

Sources for RNU1-7P Gene

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