Aliases for RNU1-75P Gene

Aliases for RNU1-75P Gene

  • RNA, U1 Small Nuclear 75, Pseudogene 2 3 5
  • RNU1-75P 5

External Ids for RNU1-75P Gene

Previous GeneCards Identifiers for RNU1-75P Gene

  • GC01M119875
  • GC00U934620

Summaries for RNU1-75P Gene

GeneCards Summary for RNU1-75P Gene

RNU1-75P (RNA, U1 Small Nuclear 75, Pseudogene) is a Pseudogene.

Additional gene information for RNU1-75P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU1-75P Gene

Genomics for RNU1-75P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNU1-75P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J119331 Enhancer 0.6 Ensembl ENCODE 250.7 -0.9 -868 2 ETS1 POU5F1 POLR2A RF00003-004 RNU1-75P piR-34697-002 piR-31470-028 piR-58297-022 piR-56995 LINC00622 ENSG00000227712 HSALNG0006483 LINC01780
GH01J119278 Enhancer 0.8 Ensembl ENCODE 11 +51.7 51703 2 JUND CEBPB DEK MAX EP300 CTBP1 RFX5 STAT3 USF2 FOSL2 HSALNG0006480 HAO2 HAO2-IT1 RNU1-75P WARS2 lnc-HAO2-11 HSALNG0006468-002 ENSG00000227712
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU1-75P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNU1-75P Gene

Latest Assembly
chr1:119,331,397-119,331,525
(GRCh38/hg38)
Size:
129 bases
Orientation:
Minus strand

Previous Assembly
chr1:119,874,020-119,874,148
(GRCh37/hg19 by Entrez Gene)
Size:
129 bases
Orientation:
Minus strand

chr1:119,874,020-119,874,148
(GRCh37/hg19 by Ensembl)
Size:
129 bases
Orientation:
Minus strand

Genomic View for RNU1-75P Gene

Genes around RNU1-75P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-75P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-75P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-75P Gene

Proteins for RNU1-75P Gene

Post-translational modifications for RNU1-75P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-75P Gene

Domains & Families for RNU1-75P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU1-75P Gene

Function for RNU1-75P Gene

Phenotypes From GWAS Catalog for RNU1-75P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-75P Gene

Localization for RNU1-75P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU1-75P Gene

Pathways & Interactions for RNU1-75P Gene

PathCards logo

SuperPathways for RNU1-75P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU1-75P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU1-75P Gene

Drugs & Compounds for RNU1-75P Gene

No Compound Related Data Available

Transcripts for RNU1-75P Gene

mRNA/cDNA for RNU1-75P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-75P Gene

No ASD Table

Relevant External Links for RNU1-75P Gene

GeneLoc Exon Structure for
RNU1-75P

Expression for RNU1-75P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU1-75P Gene

genes like me logo Genes that share expression patterns with RNU1-75P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU1-75P Gene

Orthologs for RNU1-75P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU1-75P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia U1 30
  • 82 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Gm22666 30
  • 51 (a)
ManyToMany
Lizard
(Anolis carolinensis)
Reptilia U1 30
  • 55 (a)
ManyToMany
Species where no ortholog for RNU1-75P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNU1-75P Gene

ENSEMBL:
Gene Tree for RNU1-75P (if available)
TreeFam:
Gene Tree for RNU1-75P (if available)
Alliance of Genome Resources:
Additional Orthologs for RNU1-75P

Paralogs for RNU1-75P Gene

No data available for Paralogs for RNU1-75P Gene

Variants for RNU1-75P Gene

Additional Variant Information for RNU1-75P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-75P
Leiden Open Variation Database (LOVD)
RNU1-75P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-75P Gene

Disorders for RNU1-75P Gene

No disorders were found for RNU1-75P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-75P Gene

Publications for RNU1-75P Gene

No publications were found for RNU1-75P Gene.

No data available for Mastermind for RNU1-75P Gene

Products for RNU1-75P Gene

Sources for RNU1-75P Gene