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Aliases for RNU1-5P Gene

Subcategory (RNA class) for RNU1-5P Gene

snRNA

Aliases for RNU1-5P Gene

  • RNA, U1 Small Nuclear 5, Pseudogene 2 3 5
  • RNA, U1 Small Nuclear 5 2
  • RNU1-5 3

External Ids for RNU1-5P Gene

ORGUL Members for RNU1-5P Gene

Previous HGNC Symbols for RNU1-5P Gene

  • RNU1-5

Previous GeneCards Identifiers for RNU1-5P Gene

  • GC00U934307
  • GC01P016880
  • GC01P016884
  • GC01P016887
  • GC01P016906
  • GC01P016915
  • GC01P016920

Summaries for RNU1-5P Gene

GeneCards Summary for RNU1-5P Gene

RNU1-5P (RNA, U1 Small Nuclear 5, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU1-5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-5P Gene

Genomics for RNU1-5P Gene

GeneHancer (GH) Regulatory Elements for RNU1-5P Gene

Promoters and enhancers for RNU1-5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I016871 Enhancer 1 Ensembl ENCODE 550.8 -1.2 -1201 2.7 KLF17 SIN3A ZNF76 ZEB1 ZNF335 GLIS2 POLR3A ZNF366 ZNF391 KLF13 GC01P016918 GC01P016932 RNU1-5P TRE-TTC3-1 MST1L LOC105376805 ENSG00000261135 CROCC
GH01I016874 Enhancer 0.7 Ensembl ENCODE 550.8 +1.6 1646 1.2 CTCF POLR3A ZBTB33 MLLT1 RARA EZH2 GC01P016900 GC01P016932 RNU1-5P LOC105376805 MST1P2 CROCC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU1-5P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU1-5P Gene

Genomic Locations for RNU1-5P Gene
chr1:16,873,708-16,873,851
(GRCh38/hg38)
Size:
144 bases
Orientation:
Plus strand

Genomic View for RNU1-5P Gene

Genes around RNU1-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-5P Gene

Proteins for RNU1-5P Gene

Post-translational modifications for RNU1-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-5P Gene

Domains & Families for RNU1-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-5P Gene

Function for RNU1-5P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-5P Gene

Localization for RNU1-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU1-5P Gene

Pathways & Interactions for RNU1-5P Gene

SuperPathways for RNU1-5P Gene

No Data Available

Interacting Proteins for RNU1-5P Gene

Gene Ontology (GO) - Biological Process for RNU1-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU1-5P Gene

Drugs & Compounds for RNU1-5P Gene

No Compound Related Data Available

Transcripts for RNU1-5P Gene

mRNA/cDNA for RNU1-5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-5P Gene

No ASD Table

Relevant External Links for RNU1-5P Gene

GeneLoc Exon Structure for
RNU1-5P
ECgene alternative splicing isoforms for
RNU1-5P

Expression for RNU1-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU1-5P Gene

Orthologs for RNU1-5P Gene

Evolution for RNU1-5P Gene

ENSEMBL:
Gene Tree for RNU1-5P (if available)
TreeFam:
Gene Tree for RNU1-5P (if available)

No data available for Orthologs for RNU1-5P Gene

Paralogs for RNU1-5P Gene

No data available for Paralogs for RNU1-5P Gene

Variants for RNU1-5P Gene

Additional Variant Information for RNU1-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-5P Gene

Disorders for RNU1-5P Gene

No disorders were found for RNU1-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-5P Gene

Publications for RNU1-5P Gene

No publications were found for RNU1-5P Gene.

Products for RNU1-5P Gene

Sources for RNU1-5P Gene

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