Aliases for RNPS1P1 Gene

Aliases for RNPS1P1 Gene

  • RNA Binding Protein With Serine Rich Domain 1 Pseudogene 1 2 3 5
  • RNA Binding Protein S1, Serine-Rich Domain Pseudogene 1 2 3
  • RNPS1P1 5

External Ids for RNPS1P1 Gene

Previous GeneCards Identifiers for RNPS1P1 Gene

  • GC00U932667
  • GC04P011372
  • GC04P011378
  • GC04P011383
  • GC04P011389
  • GC04P011385
  • GC04P011391
  • GC04P012630
  • GC04P012795
  • GC04P012815
  • GC04P013165
  • GC04P011486
  • GC04P011509
  • GC04P011666
  • GC04P011823
  • GC04P011986
  • GC04P012144
  • GC04P012306
  • GC04P012465

Summaries for RNPS1P1 Gene

GeneCards Summary for RNPS1P1 Gene

RNPS1P1 (RNA Binding Protein With Serine Rich Domain 1 Pseudogene 1) is a Pseudogene.

Additional gene information for RNPS1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNPS1P1 Gene

Genomics for RNPS1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNPS1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J011368 Promoter 0.7 Ensembl CraniofacialAtlas 600.7 +0.4 379 1.6 MIR572 RNPS1P1 piR-39858-468 piR-41525-509 HS3ST1 lnc-DRD5-23-001 CLNK
GH04J011341 Enhancer 0.4 Ensembl 12.8 -26.9 -26920 0.2 TBX21 ATF7 MTA2 RNPS1P1 MIR572 piR-38372-005 lnc-DRD5-8 HS3ST1 lnc-DRD5-23-001 CLNK
GH04J011343 Enhancer 0.3 Ensembl 12.8 -25.3 -25320 1 SMARCA4 RNPS1P1 MIR572 lnc-DRD5-8 piR-38372-005 HS3ST1 lnc-DRD5-23-001 CLNK
GH04J011348 Enhancer 0.2 Ensembl 13 -20.0 -20020 0.8 RNPS1P1 MIR572 HS3ST1 piR-38372-005 lnc-DRD5-8 lnc-DRD5-23-001 CLNK
GH04J011339 Enhancer 0.5 Ensembl ENCODE 0.3 -29.3 -29321 1.4 IKZF2 IKZF1 HS3ST1 piR-38372-005 RNPS1P1 lnc-DRD5-8 lnc-DRD5-23-001 CLNK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNPS1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNPS1P1 Gene

Genomic Locations for RNPS1P1 Gene
chr4:11,368,821-11,373,749
(GRCh38/hg38)
Size:
4,929 bases
Orientation:
Plus strand
chr4:11,370,474-11,375,363
(GRCh37/hg19)
Size:
4,890 bases
Orientation:
Plus strand

Genomic View for RNPS1P1 Gene

Genes around RNPS1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNPS1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNPS1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNPS1P1 Gene

Proteins for RNPS1P1 Gene

Post-translational modifications for RNPS1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNPS1P1 Gene

Domains & Families for RNPS1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNPS1P1 Gene

Function for RNPS1P1 Gene

Phenotypes From GWAS Catalog for RNPS1P1 Gene

Phenotypes for RNPS1P1 Gene

GenomeRNAi human phenotypes for RNPS1P1:
genes like me logo Genes that share phenotypes with RNPS1P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNPS1P1 Gene

Localization for RNPS1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNPS1P1 Gene

Pathways & Interactions for RNPS1P1 Gene

PathCards logo

SuperPathways for RNPS1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNPS1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNPS1P1 Gene

Drugs & Compounds for RNPS1P1 Gene

No Compound Related Data Available

Transcripts for RNPS1P1 Gene

mRNA/cDNA for RNPS1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNPS1P1 Gene

No ASD Table

Relevant External Links for RNPS1P1 Gene

GeneLoc Exon Structure for
RNPS1P1

Expression for RNPS1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNPS1P1 Gene

genes like me logo Genes that share expression patterns with RNPS1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNPS1P1 Gene

Orthologs for RNPS1P1 Gene

Evolution for RNPS1P1 Gene

ENSEMBL:
Gene Tree for RNPS1P1 (if available)
TreeFam:
Gene Tree for RNPS1P1 (if available)

No data available for Orthologs for RNPS1P1 Gene

Paralogs for RNPS1P1 Gene

No data available for Paralogs for RNPS1P1 Gene

Variants for RNPS1P1 Gene

Additional Variant Information for RNPS1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNPS1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNPS1P1 Gene

Disorders for RNPS1P1 Gene

No disorders were found for RNPS1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNPS1P1 Gene

Publications for RNPS1P1 Gene

  1. Generation of a transcriptional map for a 700-kb region surrounding the polycystic kidney disease type 1 (PKD1) and tuberous sclerosis type 2 (TSC2) disease genes on human chromosome 16p3.3. (PMID: 8828041) Burn TC … Landes GM (Genome research 1996) 3

Products for RNPS1P1 Gene

Sources for RNPS1P1 Gene