Aliases for RNFT1P2 Gene

Aliases for RNFT1P2 Gene

  • Ring Finger Protein, Transmembrane 1 Pseudogene 2 2 3 5
  • RNFT1P2 5

External Ids for RNFT1P2 Gene

Previous GeneCards Identifiers for RNFT1P2 Gene

  • GC01M078638

Summaries for RNFT1P2 Gene

GeneCards Summary for RNFT1P2 Gene

RNFT1P2 (Ring Finger Protein, Transmembrane 1 Pseudogene 2) is a Pseudogene.

Additional gene information for RNFT1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNFT1P2 Gene

Genomics for RNFT1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNFT1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J078171 Enhancer 0.6 Ensembl ENCODE 250.7 -0.8 -764 2 MAFK JUND EP300 FOS RNFT1P2 lnc-FUBP1-4 GIPC2 PTGFR DNAJB4 HSALNG0004620
GH01J078157 Enhancer 0.5 Ensembl 0.4 +13.8 13837 0.8 CEBPB MAX EP300 MAFF ZNF316 MAFK JUND ATF4 EMSY GIPC2 HSALNG0004619 RNFT1P2 lnc-FUBP1-4 PTGFR
GH01J078176 Enhancer 0.5 Ensembl 0.4 -5.3 -5264 0.6 JUND ZBTB48 ZNF561 ZNF366 ZSCAN5C lnc-FUBP1-4 RNFT1P2 HSALNG0004620 PTGFR GIPC2
GH01J078154 Enhancer 0.4 Ensembl 0.4 +16.1 16136 1 YY1 PKNOX1 SCRT2 HSALNG0004619 PTGFR GIPC2 lnc-FUBP1-4 RNFT1P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNFT1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNFT1P2 Gene

Latest Assembly
chr1:78,169,840-78,171,237
(GRCh38/hg38)
Size:
1,398 bases
Orientation:
Minus strand

Previous Assembly
chr1:78,635,524-78,636,916
(GRCh37/hg19 by Entrez Gene)
Size:
1,393 bases
Orientation:
Minus strand

chr1:78,636,165-78,636,921
(GRCh37/hg19 by Ensembl)
Size:
757 bases
Orientation:
Minus strand

Genomic View for RNFT1P2 Gene

Genes around RNFT1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNFT1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNFT1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNFT1P2 Gene

Proteins for RNFT1P2 Gene

Post-translational modifications for RNFT1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNFT1P2 Gene

Domains & Families for RNFT1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNFT1P2 Gene

Function for RNFT1P2 Gene

Phenotypes From GWAS Catalog for RNFT1P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNFT1P2 Gene

Localization for RNFT1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNFT1P2 Gene

Pathways & Interactions for RNFT1P2 Gene

PathCards logo

SuperPathways for RNFT1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNFT1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNFT1P2 Gene

Drugs & Compounds for RNFT1P2 Gene

No Compound Related Data Available

Transcripts for RNFT1P2 Gene

mRNA/cDNA for RNFT1P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNFT1P2 Gene

No ASD Table

Relevant External Links for RNFT1P2 Gene

GeneLoc Exon Structure for
RNFT1P2

Expression for RNFT1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNFT1P2 Gene

mRNA differential expression in normal tissues according to GTEx for RNFT1P2 Gene

This gene is overexpressed in Spleen (x6.3), Pancreas (x6.1), and Adrenal Gland (x6.0).
genes like me logo Genes that share expression patterns with RNFT1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNFT1P2 Gene

Orthologs for RNFT1P2 Gene

Evolution for RNFT1P2 Gene

ENSEMBL:
Gene Tree for RNFT1P2 (if available)
TreeFam:
Gene Tree for RNFT1P2 (if available)
Alliance of Genome Resources:
Additional Orthologs for RNFT1P2

No data available for Orthologs for RNFT1P2 Gene

Paralogs for RNFT1P2 Gene

No data available for Paralogs for RNFT1P2 Gene

Variants for RNFT1P2 Gene

Additional Variant Information for RNFT1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNFT1P2
Leiden Open Variation Database (LOVD)
RNFT1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNFT1P2 Gene

Disorders for RNFT1P2 Gene

No disorders were found for RNFT1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNFT1P2 Gene

Publications for RNFT1P2 Gene

No publications were found for RNFT1P2 Gene.

No data available for Mastermind for RNFT1P2 Gene

Products for RNFT1P2 Gene

Sources for RNFT1P2 Gene