RNF6P1 Gene (Pseudogene)

Ring Finger Protein 6 Pseudogene 1

GC21M039373
GIFtS:
6
See more...

Aliases for RNF6P1 Gene

Aliases for RNF6P1 Gene

  • Ring Finger Protein 6 Pseudogene 1 2 3 5
  • Ring Finger Protein (C3H2C3 Type) 6 Pseudogene 1 2 3
  • RNF6P1 5

External Ids for RNF6P1 Gene

Previous GeneCards Identifiers for RNF6P1 Gene

  • GC21M040747

Summaries for RNF6P1 Gene

GeneCards Summary for RNF6P1 Gene

RNF6P1 (Ring Finger Protein 6 Pseudogene 1) is a Pseudogene.

Additional gene information for RNF6P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNF6P1 Gene

Genomics for RNF6P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RNF6P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH21J039377 Enhancer 0.6 Ensembl 600.7 -0.6 -571 0.9 IKZF1 MTA2 MGA KLF7 FOXK2 ZSCAN5C MEF2D KLF4 CTCF ZNF384 GET1 RNF6P1 lnc-HMGN1-2 HMGN1
GH21J039369 Enhancer 1.1 Ensembl ENCODE 0.4 +7.2 7165 3.8 PRDM10 LEF1 IKZF1 JUND DDX20 MTA2 ZSCAN4 PKNOX1 MTA1 ZNF24 GET1 HMGN1 PSMG1 lnc-WRB-1 RNF6P1 lnc-HMGN1-2 LOC105372804
GH21J039373 Enhancer 0.6 Ensembl 0.7 +2.9 2865 2 CREB1 CTCF REST RAD21 OSR2 ZBTB17 PKNOX1 MYC CUX1 SMC3 GET1 RNF6P1 lnc-HMGN1-2 lnc-WRB-1 HMGN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNF6P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNF6P1 Gene

Genomic Locations for RNF6P1 Gene
chr21:39,373,763-39,377,066
(GRCh38/hg38)
Size:
3,304 bases
Orientation:
Minus strand
chr21:40,745,689-40,748,992
(GRCh37/hg19)
Size:
3,304 bases
Orientation:
Minus strand

Genomic View for RNF6P1 Gene

Genes around RNF6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNF6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNF6P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RNF6P1 Gene

Proteins for RNF6P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RNF6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF6P1 Gene

Domains & Families for RNF6P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNF6P1 Gene

Function for RNF6P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RNF6P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNF6P1 Gene

Localization for RNF6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNF6P1 Gene

Pathways & Interactions for RNF6P1 Gene

PathCards logo

SuperPathways for RNF6P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNF6P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNF6P1 Gene

Drugs & Compounds for RNF6P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RNF6P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RNF6P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNF6P1 Gene

No ASD Table

Relevant External Links for RNF6P1 Gene

GeneLoc Exon Structure for
RNF6P1

Expression for RNF6P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNF6P1 Gene

mRNA expression in normal human tissues for RNF6P1 Gene
mRNA expression by GTEx for RNF6P1 Gene

mRNA differential expression in normal tissues according to GTEx for RNF6P1 Gene

This gene is overexpressed in Testis (x32.8) and Liver (x11.4).
genes like me logo Genes that share expression patterns with RNF6P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNF6P1 Gene

Orthologs for RNF6P1 Gene

Evolution for RNF6P1 Gene

ENSEMBL:
Gene Tree for RNF6P1 (if available)
TreeFam:
Gene Tree for RNF6P1 (if available)

No data available for Orthologs for RNF6P1 Gene

Paralogs for RNF6P1 Gene

No data available for Paralogs for RNF6P1 Gene

Variants for RNF6P1 Gene

Additional Variant Information for RNF6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNF6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNF6P1 Gene

Disorders for RNF6P1 Gene

No disorders were found for RNF6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNF6P1 Gene

Publications for RNF6P1 Gene

No publications were found for RNF6P1 Gene.

ExternalLinks

View latest publications for RNF6P1 gene in Mastermind

Products for RNF6P1 Gene

Sources for RNF6P1 Gene