Aliases for RNF32-AS1 Gene

Subcategory (RNA class) for RNF32-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for RNF32-AS1 Gene

  • RNF32 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG049272.2 91
  • HSALNG0062677 164
  • Lnc-LMBR1-1 165
  • AC005534.1 5

External Ids for RNF32-AS1 Gene

Summaries for RNF32-AS1 Gene

GeneCards Summary for RNF32-AS1 Gene

RNF32-AS1 (RNF32 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RNF32-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNF32-AS1 Gene

Genomics for RNF32-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNF32-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J156618 Enhancer 0.8 Ensembl ENCODE 11.2 +39.7 39744 2.1 RFX1 ZNF7 ZNF740 CEBPA MEF2D GTF2A2 RELA CEBPG HDAC8 ZNF592 LINC01006 RNF32 RNF32-AS1 RF00017-6797 piR-50968-128 SHH
GH07J156661 Enhancer 0.7 ENCODE 0.7 -2.7 -2726 1 JUND DPF2 SOX6 EP300 HMBOX1 NCOR1 STAT5A ZNF592 TAL1 CREM RF00017-6799 LINC01006 RNF32 RNF32-AS1 LMBR1
GH07J156654 Enhancer 0.6 Ensembl 0.7 +4.8 4786 0.4 TCF12 EED RELB RUNX3 JUNB IRF4 BATF RB1 ATF2 TCF7 RF00017-6798 RNF32-AS1 RNF32 LMBR1
GH07J156656 Enhancer 0.6 Ensembl 0.7 +2.8 2786 0.4 EED DPF2 RELB RUNX3 BCLAF1 CBFB IKZF1 NR2F1 EBF1 IKZF2 LINC01006 RNF32-AS1 RF00017-6798 RNF32 LMBR1
GH07J156663 Enhancer 0.3 ENCODE 0.7 -4.6 -4593 0.6 POLR2A RF00017-6799 LINC01006 RNF32 RNF32-AS1 LMBR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNF32-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNF32-AS1 Gene

Genomic Locations for RNF32-AS1 Gene
chr7:156,654,185-156,659,587
(GRCh38/hg38)
Size:
5,403 bases
Orientation:
Minus strand

Genomic View for RNF32-AS1 Gene

Genes around RNF32-AS1 on UCSC Golden Path with GeneCards custom track
RNF32-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
RNF32-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNF32-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNF32-AS1 Gene

Proteins for RNF32-AS1 Gene

Post-translational modifications for RNF32-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNF32-AS1 Gene

Domains & Families for RNF32-AS1 Gene

Gene Families for RNF32-AS1 Gene

genes like me logo Genes that share domains with RNF32-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNF32-AS1 Gene

Function for RNF32-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNF32-AS1 Gene

Localization for RNF32-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNF32-AS1 Gene

Pathways & Interactions for RNF32-AS1 Gene

PathCards logo

SuperPathways for RNF32-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNF32-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNF32-AS1 Gene

Drugs & Compounds for RNF32-AS1 Gene

No Compound Related Data Available

Transcripts for RNF32-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RNF32-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000065268_9606 lncRNA 742 4

Ensembl: ENST00000455709 (view in UCSC) ,

LncBook: HSALNT0131455,

LNCipedia: lnc-LMBR1-1:5,

NONCODE: NONHSAT124431.2,

URS0000EF09F4_9606 lncRNA 3727 1

Ensembl: ENST00000670834 (view in UCSC) ,

URS00009B977A_9606 lncRNA 985 2

LncBook: HSALNT0131457,

NONCODE: NONHSAT214204.1,

URS00009AEF13_9606 lncRNA 742 2

LncBook: HSALNT0131456,

NONCODE: NONHSAT214203.1,

RNF32-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for RNF32-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for RNF32-AS1 Gene

No ASD Table

Relevant External Links for RNF32-AS1 Gene

GeneLoc Exon Structure for
RNF32-AS1

Expression for RNF32-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNF32-AS1 Gene

Orthologs for RNF32-AS1 Gene

Evolution for RNF32-AS1 Gene

ENSEMBL:
Gene Tree for RNF32-AS1 (if available)
TreeFam:
Gene Tree for RNF32-AS1 (if available)

No data available for Orthologs for RNF32-AS1 Gene

Paralogs for RNF32-AS1 Gene

No data available for Paralogs for RNF32-AS1 Gene

Variants for RNF32-AS1 Gene

Additional dbSNP identifiers (rs#s) for RNF32-AS1 Gene

Additional Variant Information for RNF32-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNF32-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNF32-AS1 Gene

Disorders for RNF32-AS1 Gene

No disorders were found for RNF32-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNF32-AS1 Gene

Publications for RNF32-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for RNF32-AS1 Gene

Products for RNF32-AS1 Gene

Sources for RNF32-AS1 Gene