Aliases for RNA5SP411 Gene

Aliases for RNA5SP411 Gene

  • RNA, 5S Ribosomal Pseudogene 411 2 3 5
  • RNA, 5S Ribosomal 411 2 3
  • RNA5SP411 5
  • RN5S411 3

External Ids for RNA5SP411 Gene

Previous HGNC Symbols for RNA5SP411 Gene

  • RN5S411

Previous GeneCards Identifiers for RNA5SP411 Gene

  • GC16P035139
  • GC16P035169
  • GC16U901615

Summaries for RNA5SP411 Gene

GeneCards Summary for RNA5SP411 Gene

RNA5SP411 (RNA, 5S Ribosomal Pseudogene 411) is a Pseudogene.

Additional gene information for RNA5SP411 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNA5SP411 Gene

Genomics for RNA5SP411 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNA5SP411 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J035747 Promoter 0.3 EPDnew 600.7 +0.0 5 0.1 LINC02167 RNA5SP410 RNA5SP411 RNA5SP412 RNA5SP413 RNA5SP414 LOC107984902
GH16J035745 Enhancer 0.2 FANTOM5 600.7 -1.0 -1041 0.4 RNA5SP410 RNA5SP411 RNA5SP412 RNA5SP413 LINC02167 LOC107984902
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNA5SP411 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNA5SP411 Gene

Genomic Locations for RNA5SP411 Gene
chr16:35,746,523-35,746,636
(GRCh38/hg38)
Size:
114 bases
Orientation:
Plus strand

Genomic View for RNA5SP411 Gene

Genes around RNA5SP411 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP411 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP411 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP411 Gene

Proteins for RNA5SP411 Gene

Post-translational modifications for RNA5SP411 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP411 Gene

Domains & Families for RNA5SP411 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNA5SP411 Gene

Function for RNA5SP411 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP411 Gene

Localization for RNA5SP411 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP411 Gene

Pathways & Interactions for RNA5SP411 Gene

PathCards logo

SuperPathways for RNA5SP411 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNA5SP411 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNA5SP411 Gene

Drugs & Compounds for RNA5SP411 Gene

No Compound Related Data Available

Transcripts for RNA5SP411 Gene

mRNA/cDNA for RNA5SP411 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP411 Gene

No ASD Table

Relevant External Links for RNA5SP411 Gene

GeneLoc Exon Structure for
RNA5SP411

Expression for RNA5SP411 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP411 Gene

Orthologs for RNA5SP411 Gene

Evolution for RNA5SP411 Gene

ENSEMBL:
Gene Tree for RNA5SP411 (if available)
TreeFam:
Gene Tree for RNA5SP411 (if available)

No data available for Orthologs for RNA5SP411 Gene

Paralogs for RNA5SP411 Gene

No data available for Paralogs for RNA5SP411 Gene

Variants for RNA5SP411 Gene

Additional Variant Information for RNA5SP411 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP411

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP411 Gene

Disorders for RNA5SP411 Gene

No disorders were found for RNA5SP411 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP411 Gene

Publications for RNA5SP411 Gene

No publications were found for RNA5SP411 Gene.

Products for RNA5SP411 Gene

Sources for RNA5SP411 Gene