Aliases for RNA5SP331 Gene
Subcategory (RNA class) for RNA5SP331 Gene
rRNA
Aliases for RNA5SP331 Gene
External Ids for RNA5SP331 Gene
- HGNC: 43231
- Entrez Gene: 100873597
- Ensembl: ENSG00000201856
Previous HGNC Symbols for RNA5SP331 Gene
- RN5S331
Previous GeneCards Identifiers for RNA5SP331 Gene
- GC11M013930
Summaries for RNA5SP331 Gene
GeneCards Summary for RNA5SP331 Gene
RNA5SP331 (RNA, 5S Ribosomal Pseudogene 331) is a Pseudogene, and is affiliated with the rRNA class.
Additional gene information for RNA5SP331 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP331 Gene
Genomics for RNA5SP331 Gene
GeneHancer (GH) Regulatory Elements for RNA5SP331 Gene
Promoters and enhancers for RNA5SP331 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J013907 | Enhancer | 0.3 | dbSUPER | 600.7 | -0.9 | -942 | 2.7 | GATA3 | GC11M013907 GC11P013907 RNA5SP331 LINC02683 | |
| GH11J013906 | Enhancer | 0.2 | Ensembl | 600.7 | +1.3 | 1289 | 0.2 | GC11M013907 GC11P013907 RNA5SP331 ENSG00000254927 | ||
| GH11J013922 | Promoter/Enhancer | 1.5 | Ensembl ENCODE dbSUPER | 0.4 | -16.2 | -16232 | 2.4 | BACH1 TRIM24 PKNOX1 ZNF24 HDAC1 NRF1 EP300 MGA POLR2A CTBP1 | LINC02683 GC11M013907 RNA5SP331 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RNA5SP331 on UCSC Golden Path with GeneCards custom track
Genomic Locations for RNA5SP331 Gene
Genomic Locations for RNA5SP331 Gene
- chr11:13,907,484-13,907,590
- (GRCh38/hg38)
- Size:
- 107 bases
- Orientation:
- Minus strand
- chr11:13,929,031-13,929,137
- (GRCh37/hg19)
- Size:
- 107 bases
- Orientation:
- Minus strand
Genomic View for RNA5SP331 Gene
Genes around RNA5SP331 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p15.2 by HGNC
- 11p15.2 by Entrez Gene
- 11p15.2 by Ensembl
RNA5SP331 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RNA5SP331 Gene
Proteins for RNA5SP331 Gene
Post-translational modifications for RNA5SP331 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RNA5SP331
- Origene Custom Protein Services for RNA5SP331
No data available for DME Specific Peptides for RNA5SP331 Gene
Domains & Families for RNA5SP331 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP331 Gene
Function for RNA5SP331 Gene
Phenotypes From GWAS Catalog for RNA5SP331 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for RNA5SP331
-
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RNA5SP331 - Now 50% OFF >
- * RNA5SP331 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * RNA5SP331 CRISPR applications: KO, Activation, Repression, and more - Browse All
- Browse CRISPR knockouts for RNA5SP331
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for RNA5SP331 - Now 50% OFF >
- * RNA5SP331 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * RNA5SP331 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP331 Gene
Localization for RNA5SP331 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP331 Gene
Transcripts for RNA5SP331 Gene
mRNA/cDNA for RNA5SP331 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000364986 107 bps (ENST00000364986.1)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RNA5SP331 - Now 50% OFF >
- * RNA5SP331 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * RNA5SP331 CRISPR applications: KO, Activation, Repression, and more - Browse All
- Browse CRISPR knockouts for RNA5SP331
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for RNA5SP331 - Now 50% OFF >
- * RNA5SP331 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * RNA5SP331 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
Expression for RNA5SP331 Gene
NURSA nuclear receptor signaling pathways regulating expression of RNA5SP331 Gene:
RNA5SP331
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP331 Gene
Orthologs for RNA5SP331 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | 5S_rRNA 35 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | 5S_rRNA 35 |
|
OneToMany | |
| cow (Bos Taurus) |
Mammalia | 5S_rRNA 35 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | 5S_rRNA 35 |
|
OneToMany |
- Species where no ortholog for RNA5SP331 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- mouse (Mus musculus)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for RNA5SP331 Gene
No data available for Paralogs for RNA5SP331 Gene
Variants for RNA5SP331 Gene
Additional Variant Information for RNA5SP331 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RNA5SP331
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP331 Gene
Disorders for RNA5SP331 Gene
No disorders were found for RNA5SP331 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP331 Gene
Publications for RNA5SP331 Gene
No publications were found for RNA5SP331 Gene.
Products for RNA5SP331 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RNA5SP331
- Origene Custom Protein Services for RNA5SP331
- Browse OriGene Inhibitory RNA Products For RNA5SP331
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RNA5SP331
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RNA5SP331
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for RNA5SP331
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RNA5SP331
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RNA5SP331
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RNA5SP331
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RNA5SP331
Sources for RNA5SP331 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind