Aliases for RNA5SP257 Gene

Aliases for RNA5SP257 Gene

  • RNA, 5S Ribosomal Pseudogene 257 2 3 5
  • RNA, 5S Ribosomal 257 2 3
  • RNA5SP257 5
  • RN5S257 3

External Ids for RNA5SP257 Gene

Previous HGNC Symbols for RNA5SP257 Gene

  • RN5S257

Previous GeneCards Identifiers for RNA5SP257 Gene

  • GC08P020148
  • GC08U901707

Summaries for RNA5SP257 Gene

GeneCards Summary for RNA5SP257 Gene

RNA5SP257 (RNA, 5S Ribosomal Pseudogene 257) is a Pseudogene.

Additional gene information for RNA5SP257 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNA5SP257 Gene

Genomics for RNA5SP257 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNA5SP257 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J020287 Enhancer 0.9 Ensembl ENCODE dbSUPER 600.7 -0.9 -873 3.8 ZIC2 POLR2A RAD21 ZFHX2 SPI1 ZNF571 MYC MAX EGR2 SP7 RF00001-321 RNA5SP257 LZTS1 LZTS1-AS1 ATP6V1B2
GH08J020281 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -6.7 -6698 3.4 ZNF629 ZIC2 ZNF766 CEBPB OSR2 FOS MAFK ZNF189 POLR2A BHLHE40 INTS10 LZTS1-AS1 RNA5SP257 RF00001-321 LZTS1 ATP6V1B2
GH08J020276 Enhancer 0.9 ENCODE dbSUPER 0.4 -12.8 -12821 1.5 DDX20 ZNF740 ZNF766 NFE2 E2F5 USF1 NR2C2 ZBTB11 GABPA MEF2D LZTS1-AS1 LZTS1 INTS10 RNU6-892P RNA5SP257 RF00001-321 ATP6V1B2
GH08J020279 Enhancer 0.6 ENCODE dbSUPER 0.4 -9.8 -9792 1.1 POLR2A MNT TBP RNU6-892P LZTS1-AS1 RNA5SP257 RF00001-321 LZTS1 ATP6V1B2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNA5SP257 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNA5SP257 Gene

Genomic Locations for RNA5SP257 Gene
chr8:20,290,174-20,290,289
(GRCh38/hg38)
Size:
116 bases
Orientation:
Plus strand

Genomic View for RNA5SP257 Gene

Genes around RNA5SP257 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP257 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP257 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP257 Gene

Proteins for RNA5SP257 Gene

Post-translational modifications for RNA5SP257 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP257 Gene

Domains & Families for RNA5SP257 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNA5SP257 Gene

Function for RNA5SP257 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP257 Gene

Localization for RNA5SP257 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP257 Gene

Pathways & Interactions for RNA5SP257 Gene

PathCards logo

SuperPathways for RNA5SP257 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNA5SP257 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNA5SP257 Gene

Drugs & Compounds for RNA5SP257 Gene

No Compound Related Data Available

Transcripts for RNA5SP257 Gene

mRNA/cDNA for RNA5SP257 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP257 Gene

No ASD Table

Relevant External Links for RNA5SP257 Gene

GeneLoc Exon Structure for
RNA5SP257

Expression for RNA5SP257 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP257 Gene

Orthologs for RNA5SP257 Gene

Evolution for RNA5SP257 Gene

ENSEMBL:
Gene Tree for RNA5SP257 (if available)
TreeFam:
Gene Tree for RNA5SP257 (if available)

No data available for Orthologs for RNA5SP257 Gene

Paralogs for RNA5SP257 Gene

No data available for Paralogs for RNA5SP257 Gene

Variants for RNA5SP257 Gene

Additional Variant Information for RNA5SP257 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP257

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP257 Gene

Disorders for RNA5SP257 Gene

No disorders were found for RNA5SP257 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP257 Gene

Publications for RNA5SP257 Gene

No publications were found for RNA5SP257 Gene.

No data available for Mastermind for RNA5SP257 Gene

Products for RNA5SP257 Gene

Sources for RNA5SP257 Gene