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Aliases for RNA5SP192 Gene

Subcategory (RNA class) for RNA5SP192 Gene

rRNA

Aliases for RNA5SP192 Gene

  • RNA, 5S Ribosomal Pseudogene 192 2 3 5
  • RNA, 5S Ribosomal 192 2 3
  • RN5S192 3

External Ids for RNA5SP192 Gene

ORGUL Members for RNA5SP192 Gene

Previous HGNC Symbols for RNA5SP192 Gene

  • RN5S192

Previous GeneCards Identifiers for RNA5SP192 Gene

  • GC05P132185

Summaries for RNA5SP192 Gene

GeneCards Summary for RNA5SP192 Gene

RNA5SP192 (RNA, 5S Ribosomal Pseudogene 192) is a Pseudogene, and is affiliated with the rRNA class.

Additional gene information for RNA5SP192 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA5SP192 Gene

Genomics for RNA5SP192 Gene

GeneHancer (GH) Regulatory Elements for RNA5SP192 Gene

Promoters and enhancers for RNA5SP192 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I132848 Enhancer 1 ENCODE dbSUPER 550.8 +1.0 998 1.3 ELF3 FOXA2 RAD21 RARA YY1 ZNF335 FOS ATF7 CREM RXRA GC05P132849 RNA5SP192 GDF9 SLC22A4 UQCRQ
GH05I132770 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 10.6 -74.1 -74074 7.9 HDGF PKNOX1 ARID4B SIN3A ZBTB7B YY1 ZNF766 ZNF143 ZNF263 SP3 SEPT8 GC05M132776 GC05M132777 IL4 ENSG00000202533 LOC105379175 CCNI2 KIF3A SOWAHA AFF4
GH05I132812 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 11.6 -33.0 -32974 5.4 BMI1 YY1 ZNF335 GLIS2 KLF13 EGR2 ZNF202 ZNF362 CEBPB ZEB2 SOWAHA IL4 GDF9 RAD50 AFF4 RNU7-15P RNA5SP192 CCNI2 UQCRQ KIF3A
GH05I132736 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.2 -110.8 -110798 2.6 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 BRCA1 ZNF48 YY1 POLR2B KIF3A SEPT8 ENSG00000230612 IL4 TH2LCRR IL13 SHROOM1 IL5 RAD50 RNU7-15P
GH05I132406 Promoter/Enhancer 1.9 Ensembl ENCODE dbSUPER 9.8 -435.8 -435841 11.5 HDGF PKNOX1 FOXA2 ARID4B NEUROD1 SIN3A DMAP1 YBX1 IRF4 YY1 ENSG00000283782 MIR3936HG RAD50 MIR3936 P4HA2 ENSG00000202533 LOC105379175 IRF1 ENSG00000224431 IL5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNA5SP192 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNA5SP192 Gene

Genomic Locations for RNA5SP192 Gene
chr5:132,848,577-132,848,696
(GRCh38/hg38)
Size:
120 bases
Orientation:
Plus strand
chr5:132,184,269-132,184,388
(GRCh37/hg19)

Genomic View for RNA5SP192 Gene

Genes around RNA5SP192 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5SP192 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5SP192 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5SP192 Gene

Proteins for RNA5SP192 Gene

Post-translational modifications for RNA5SP192 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5SP192 Gene

Domains & Families for RNA5SP192 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNA5SP192 Gene

Function for RNA5SP192 Gene

Phenotypes From GWAS Catalog for RNA5SP192 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5SP192 Gene

Localization for RNA5SP192 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5SP192 Gene

Pathways & Interactions for RNA5SP192 Gene

SuperPathways for RNA5SP192 Gene

No Data Available

Interacting Proteins for RNA5SP192 Gene

Gene Ontology (GO) - Biological Process for RNA5SP192 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA5SP192 Gene

Drugs & Compounds for RNA5SP192 Gene

No Compound Related Data Available

Transcripts for RNA5SP192 Gene

mRNA/cDNA for RNA5SP192 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5SP192 Gene

No ASD Table

Relevant External Links for RNA5SP192 Gene

GeneLoc Exon Structure for
RNA5SP192
ECgene alternative splicing isoforms for
RNA5SP192

Expression for RNA5SP192 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNA5SP192 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNA5SP192 Gene:

RNA5SP192
genes like me logo Genes that share expression patterns with RNA5SP192: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5SP192 Gene

Orthologs for RNA5SP192 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNA5SP192 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 5S_rRNA 34
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia 5S_rRNA 34
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 5S_rRNA 34
  • 70 (a)
OneToMany
mouse
(Mus musculus)
Mammalia n-R5s61 34
  • 64 (a)
ManyToMany
Species where no ortholog for RNA5SP192 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNA5SP192 Gene

ENSEMBL:
Gene Tree for RNA5SP192 (if available)
TreeFam:
Gene Tree for RNA5SP192 (if available)

Paralogs for RNA5SP192 Gene

No data available for Paralogs for RNA5SP192 Gene

Variants for RNA5SP192 Gene

Additional Variant Information for RNA5SP192 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5SP192

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5SP192 Gene

Disorders for RNA5SP192 Gene

No disorders were found for RNA5SP192 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5SP192 Gene

Publications for RNA5SP192 Gene

No publications were found for RNA5SP192 Gene.

Products for RNA5SP192 Gene

Sources for RNA5SP192 Gene

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