Aliases for RNA5-8SP4 Gene

Aliases for RNA5-8SP4 Gene

  • RNA, 5.8S Ribosomal Pseudogene 4 2 3 5
  • RNA, 5.8S Ribosomal 4 2
  • RNA5-8SP4 5
  • RN5-8S4 3

External Ids for RNA5-8SP4 Gene

Previous HGNC Symbols for RNA5-8SP4 Gene

  • RN5-8S4

Previous GeneCards Identifiers for RNA5-8SP4 Gene

  • GC19M024189
  • GC19M024005
  • GC19M024103

Summaries for RNA5-8SP4 Gene

GeneCards Summary for RNA5-8SP4 Gene

RNA5-8SP4 (RNA, 5.8S Ribosomal Pseudogene 4) is a Pseudogene.

Additional gene information for RNA5-8SP4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNA5-8SP4 Gene

Genomics for RNA5-8SP4 Gene

Genomic Locations for RNA5-8SP4 Gene

Genomic Locations for RNA5-8SP4 Gene
chr19:24,004,358-24,004,507
(GRCh38/hg38)
Size:
150 bases
Orientation:
Minus strand
chr19:24,187,160-24,187,309
(GRCh37/hg19)
Size:
150 bases
Orientation:
Minus strand

Genomic View for RNA5-8SP4 Gene

Genes around RNA5-8SP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNA5-8SP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNA5-8SP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNA5-8SP4 Gene

No data available for GeneHancer (GH) Regulatory Elements for RNA5-8SP4 Gene

Proteins for RNA5-8SP4 Gene

Post-translational modifications for RNA5-8SP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNA5-8SP4 Gene

Domains & Families for RNA5-8SP4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNA5-8SP4 Gene

Function for RNA5-8SP4 Gene

Phenotypes From GWAS Catalog for RNA5-8SP4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA5-8SP4 Gene

Localization for RNA5-8SP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA5-8SP4 Gene

Pathways & Interactions for RNA5-8SP4 Gene

PathCards logo

SuperPathways for RNA5-8SP4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNA5-8SP4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNA5-8SP4 Gene

Drugs & Compounds for RNA5-8SP4 Gene

No Compound Related Data Available

Transcripts for RNA5-8SP4 Gene

mRNA/cDNA for RNA5-8SP4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNA5-8SP4 Gene

No ASD Table

Relevant External Links for RNA5-8SP4 Gene

GeneLoc Exon Structure for
RNA5-8SP4

Expression for RNA5-8SP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNA5-8SP4 Gene

genes like me logo Genes that share expression patterns with RNA5-8SP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA5-8SP4 Gene

Orthologs for RNA5-8SP4 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNA5-8SP4 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia 5_8S_rRNA 31
  • 100 (a)
OneToOne
Dog
(Canis familiaris)
Mammalia 5_8S_rRNA 31
  • 80 (a)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia 5_8S_rRNA 31
  • 80 (a)
ManyToMany
Mouse
(Mus musculus)
Mammalia Gm24601 31
  • 76 (a)
OneToOne
Platypus
(Ornithorhynchus anatinus)
Mammalia 5_8S_rRNA 31
  • 69 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia 5_8S_rRNA 31 31
  • 64 (a)
OneToMany
Chicken
(Gallus gallus)
Aves 5_8S_rRNA 31
  • 76 (a)
ManyToMany
Zebrafish
(Danio rerio)
Actinopterygii 5_8S_rRNA 31 31 31 31 31 31 31 31 31 31 31
  • 80 (a)
ManyToMany
Sea Squirt
(Ciona savignyi)
Ascidiacea 5_8S_rRNA 31
  • 66 (a)
OneToMany
Species where no ortholog for RNA5-8SP4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for RNA5-8SP4 Gene

ENSEMBL:
Gene Tree for RNA5-8SP4 (if available)
TreeFam:
Gene Tree for RNA5-8SP4 (if available)

Paralogs for RNA5-8SP4 Gene

No data available for Paralogs for RNA5-8SP4 Gene

Variants for RNA5-8SP4 Gene

Additional Variant Information for RNA5-8SP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA5-8SP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA5-8SP4 Gene

Disorders for RNA5-8SP4 Gene

No disorders were found for RNA5-8SP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNA5-8SP4 Gene

Publications for RNA5-8SP4 Gene

No publications were found for RNA5-8SP4 Gene.

Products for RNA5-8SP4 Gene

Sources for RNA5-8SP4 Gene