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Aliases for RNA18SP5 Gene

Aliases for RNA18SP5 Gene

  • RNA, 18S Ribosomal Pseudogene 5 2 3

External Ids for RNA18SP5 Gene

Summaries for RNA18SP5 Gene

Entrez Gene Summary for RNA18SP5 Gene

  • 45S ribosomal DNA (rDNA) arrays, or clusters, are present on human chromosomes 13, 14, 15, 21 and 22, designated RNR1 through RNR5, respectively. Each cluster consists of multiple 45S rDNA repeat units that vary in number among individuals and chromosomes, with total diploid copy number estimates ranging from 60 to >800 repeat units in a human genome. The 45S rDNA repeat unit encodes a 45S rRNA precursor, transcribed by RNA polymerase I, which is processed to form the 18S, 5.8S and 28S rRNAs. This locus represents a likely pseudogene and copy of the 18S ribosomal RNA, part of an incomplete rDNA repeat unit on chromosome 21. [provided by RefSeq, May 2017]

GeneCards Summary for RNA18SP5 Gene

RNA18SP5 (RNA, 18S Ribosomal Pseudogene 5) is a Pseudogene.

Additional gene information for RNA18SP5 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNA18SP5 Gene

Genomics for RNA18SP5 Gene

Genomic Locations for RNA18SP5 Gene

Genomic Locations for RNA18SP5 Gene
chr21:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for RNA18SP5 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for RNA18SP5 Gene

No data available for GeneHancer (GH) Regulatory Elements for RNA18SP5 Gene

Function for RNA18SP5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNA18SP5 Gene

Localization for RNA18SP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNA18SP5 Gene

Pathways & Interactions for RNA18SP5 Gene

SuperPathways for RNA18SP5 Gene

No Data Available

Interacting Proteins for RNA18SP5 Gene

Gene Ontology (GO) - Biological Process for RNA18SP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNA18SP5 Gene

Drugs & Compounds for RNA18SP5 Gene

No Compound Related Data Available

Transcripts for RNA18SP5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNA18SP5 Gene

No ASD Table

Relevant External Links for RNA18SP5 Gene

ECgene alternative splicing isoforms for
RNA18SP5

No data available for mRNA/cDNA for RNA18SP5 Gene

Expression for RNA18SP5 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNA18SP5 Gene

Orthologs for RNA18SP5 Gene

No data available for Orthologs and Evolution for RNA18SP5 Gene

Paralogs for RNA18SP5 Gene

No data available for Paralogs for RNA18SP5 Gene

Variants for RNA18SP5 Gene

Additional Variant Information for RNA18SP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNA18SP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNA18SP5 Gene

Disorders for RNA18SP5 Gene

Additional Disease Information for RNA18SP5

No disorders were found for RNA18SP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNA18SP5 Gene

Publications for RNA18SP5 Gene

  1. The Epigenetic Pathways to Ribosomal DNA Silencing. (PMID: 27250769) Srivastava R … Ahn SH (Microbiology and molecular biology reviews : MMBR 2016) 3 58
  2. Nucleolar organizer regions: genomic 'dark matter' requiring illumination. (PMID: 27474438) McStay B (Genes & development 2016) 3 58
  3. A Portrait of Ribosomal DNA Contacts with Hi-C Reveals 5S and 45S rDNA Anchoring Points in the Folded Human Genome. (PMID: 27797956) Yu S … Lemos B (Genome biology and evolution 2016) 3 58
  4. An overview of pre-ribosomal RNA processing in eukaryotes. (PMID: 25346433) Henras AK … Gleizes PE (Wiley interdisciplinary reviews. RNA 2015) 3 58
  5. Concerted copy number variation balances ribosomal DNA dosage in human and mouse genomes. (PMID: 25583482) Gibbons JG … Lemos B (Proceedings of the National Academy of Sciences of the United States of America 2015) 3 58

Products for RNA18SP5 Gene

Sources for RNA18SP5 Gene

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