Aliases for RN7SL834P Gene

Aliases for RN7SL834P Gene

  • RNA, 7SL, Cytoplasmic 834, Pseudogene 2 3 5

External Ids for RN7SL834P Gene

Previous GeneCards Identifiers for RN7SL834P Gene

  • GC02P231374

Summaries for RN7SL834P Gene

GeneCards Summary for RN7SL834P Gene

RN7SL834P (RNA, 7SL, Cytoplasmic 834, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL834P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL834P Gene

Genomics for RN7SL834P Gene

GeneHancer (GH) Regulatory Elements for RN7SL834P Gene

Promoters and enhancers for RN7SL834P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J230501 Enhancer 0.7 dbSUPER 750.6 -1.2 -1212 8.1 FOXA1 SP1 MLLT1 IKZF1 RXRA FOXA2 JUND RUNX3 ZBTB33 NBN RF00017-3447 RN7SL834P lnc-SP140L-7 RNU6-451P SP140L lnc-SP110-8 NONHSAG030738.2 LOC101928816 SP100
GH02J231462 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 12.1 +957.2 957174 4.2 SIN3A SP1 ZBTB40 MLX RBPJ POLR2A USF2 NR2F1 ATF1 FOS NCL lnc-B3GNT7-4 lnc-NMUR1-2 DIS3L2 RPL28P2 ENSG00000235419 COPS7B ENSG00000251485 ARMC9 NMUR1
GH02J230471 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.2 -34.1 -34087 3.6 ZBTB40 SMARCE1 ETV6 SMARCA4 CREM EGR1 IKZF1 BACH1 TRIM22 PKNOX1 TRIP12 RN7SL834P lnc-SP110-7 piR-41306-156 lnc-SP110-8 LOC101928816 SP100
GH02J230466 Enhancer 0.3 Ensembl dbSUPER 5.5 -40.3 -40300 0.4 lnc-SP110-7 RN7SL834P piR-41306-156 lnc-SP110-8 SP100 LOC101928816 NONHSAG030735.2
GH02J230477 Enhancer 0.3 dbSUPER 5 -27.4 -27444 5.3 CBFA2T3 RN7SL834P piR-41306-156 lnc-SP110-7 lnc-SP110-8 LOC101928816 SP100
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL834P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL834P Gene

Genomic Locations for RN7SL834P Gene
chr2:230,507,101-230,507,386
(GRCh38/hg38)
Size:
286 bases
Orientation:
Plus strand
chr2:231,371,816-231,372,099
(GRCh37/hg19)
Size:
284 bases
Orientation:
Plus strand

Genomic View for RN7SL834P Gene

Genes around RN7SL834P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL834P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL834P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL834P Gene

Proteins for RN7SL834P Gene

Post-translational modifications for RN7SL834P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL834P Gene

Domains & Families for RN7SL834P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL834P Gene

Function for RN7SL834P Gene

Phenotypes From GWAS Catalog for RN7SL834P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL834P Gene

Localization for RN7SL834P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL834P Gene

Pathways & Interactions for RN7SL834P Gene

PathCards logo

SuperPathways for RN7SL834P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL834P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL834P Gene

Drugs & Compounds for RN7SL834P Gene

No Compound Related Data Available

Transcripts for RN7SL834P Gene

mRNA/cDNA for RN7SL834P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL834P Gene

No ASD Table

Relevant External Links for RN7SL834P Gene

GeneLoc Exon Structure for
RN7SL834P
ECgene alternative splicing isoforms for
RN7SL834P

Expression for RN7SL834P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL834P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL834P Gene

This gene is overexpressed in Whole Blood (x5.2).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL834P Gene:

RN7SL834P
genes like me logo Genes that share expression patterns with RN7SL834P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL834P Gene

Orthologs for RN7SL834P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL834P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 33
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL834P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL834P Gene

ENSEMBL:
Gene Tree for RN7SL834P (if available)
TreeFam:
Gene Tree for RN7SL834P (if available)

Paralogs for RN7SL834P Gene

No data available for Paralogs for RN7SL834P Gene

Variants for RN7SL834P Gene

Additional Variant Information for RN7SL834P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL834P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL834P Gene

Disorders for RN7SL834P Gene

No disorders were found for RN7SL834P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL834P Gene

Publications for RN7SL834P Gene

No publications were found for RN7SL834P Gene.

No data available for External Links for RN7SL834P Gene

Products for RN7SL834P Gene

Sources for RN7SL834P Gene