Aliases for RN7SL596P Gene

Aliases for RN7SL596P Gene

  • RNA, 7SL, Cytoplasmic 596, Pseudogene 2 3 5
  • RN7SL596P 5

External Ids for RN7SL596P Gene

Previous GeneCards Identifiers for RN7SL596P Gene

  • GC11M063566

Summaries for RN7SL596P Gene

GeneCards Summary for RN7SL596P Gene

RN7SL596P (RNA, 7SL, Cytoplasmic 596, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL596P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL596P Gene

Genomics for RN7SL596P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RN7SL596P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J063798 Enhancer 0.2 Ensembl 250.7 -0.8 -830 0.2 lnc-C11orf95-6 RN7SL596P lnc-C11orf95-1 SPINDOC ZFTA
GH11J063801 Enhancer 1.1 Ensembl ENCODE 0.4 -5.4 -5396 3.1 IKZF1 ZNF217 CEBPB ZNF395 REST IRF3 MAX EP300 CTBP1 SIN3A ATL3 PLAAT3 SPINDOC RN7SL596P lnc-C11orf95-1 lnc-C11orf95-6 ZFTA
GH11J063784 Enhancer 0.7 Ensembl ENCODE 0.4 +13.8 13826 0.9 DMAP1 TBP GLIS1 ZNF398 CEBPG SP1 PRDM4 KAT8 YY1 ELF1 ATL3 SPINDOC NAA40 RTN3 RN7SL596P lnc-C11orf95-6 ZFTA lnc-C11orf95-1
GH11J063778 Enhancer 0.6 Ensembl ENCODE 0.4 +19.0 19002 1.1 NRF1 ZNF384 RFX5 CEBPB SPINDOC RNU6-1306P ZFTA lnc-C11orf95-6 RN7SL596P lnc-C11orf95-1
GH11J063793 Enhancer 0.3 Ensembl 0.7 +4.7 4670 0.8 IKZF1 ATL3 ENSG00000256341 ENSG00000256481 RTN3 lnc-C11orf95-6 RN7SL596P lnc-C11orf95-1 SPINDOC ZFTA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL596P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RN7SL596P Gene

Latest Assembly
chr11:63,797,784-63,798,071
(GRCh38/hg38)
Size:
288 bases
Orientation:
Minus strand

Previous Assembly
chr11:63,565,256-63,565,543
(GRCh37/hg19 by Entrez Gene)
Size:
288 bases
Orientation:
Minus strand

chr11:63,565,260-63,565,543
(GRCh37/hg19 by Ensembl)
Size:
284 bases
Orientation:
Minus strand

Genomic View for RN7SL596P Gene

Genes around RN7SL596P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL596P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL596P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL596P Gene

Proteins for RN7SL596P Gene

Post-translational modifications for RN7SL596P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL596P Gene

Domains & Families for RN7SL596P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL596P Gene

Function for RN7SL596P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL596P Gene

Localization for RN7SL596P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL596P Gene

Pathways & Interactions for RN7SL596P Gene

PathCards logo

SuperPathways for RN7SL596P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL596P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SL596P Gene

Drugs & Compounds for RN7SL596P Gene

No Compound Related Data Available

Transcripts for RN7SL596P Gene

mRNA/cDNA for RN7SL596P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL596P Gene

No ASD Table

Relevant External Links for RN7SL596P Gene

GeneLoc Exon Structure for
RN7SL596P

Expression for RN7SL596P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL596P Gene

genes like me logo Genes that share expression patterns with RN7SL596P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL596P Gene

Orthologs for RN7SL596P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL596P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 31
  • 91 (a)
OneToOne
Species where no ortholog for RN7SL596P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RN7SL596P Gene

ENSEMBL:
Gene Tree for RN7SL596P (if available)
TreeFam:
Gene Tree for RN7SL596P (if available)

Paralogs for RN7SL596P Gene

No data available for Paralogs for RN7SL596P Gene

Variants for RN7SL596P Gene

Additional Variant Information for RN7SL596P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL596P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL596P Gene

Disorders for RN7SL596P Gene

No disorders were found for RN7SL596P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL596P Gene

Publications for RN7SL596P Gene

No publications were found for RN7SL596P Gene.

No data available for Mastermind for RN7SL596P Gene

Products for RN7SL596P Gene

Sources for RN7SL596P Gene