Aliases for RN7SL497P Gene

Aliases for RN7SL497P Gene

  • RNA, 7SL, Cytoplasmic 497, Pseudogene 2 3 5
  • RN7SL497P 5

External Ids for RN7SL497P Gene

Previous GeneCards Identifiers for RN7SL497P Gene

  • GC15M041487

Summaries for RN7SL497P Gene

GeneCards Summary for RN7SL497P Gene

RN7SL497P (RNA, 7SL, Cytoplasmic 497, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL497P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL497P Gene

Genomics for RN7SL497P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RN7SL497P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J041190 Promoter 0.6 Ensembl 250.7 +1.7 1664 0.4 CEBPA NRF1 CEBPG CEBPB HSALNG0105336 RN7SL497P NDUFAF1 CHP1 EXD1 ENSG00000251161 VPS18 CHAC1 RTF1 lnc-EXD1-1
GH15J041184 Enhancer 0.8 Ensembl ENCODE 0.4 +7.4 7371 0.7 ZNF654 REST TRIM22 CTCF RAD21 SMC3 EP400 L3MBTL2 ARID2 ZSCAN21 NDUFAF1 HSALNG0105336 RN7SL497P lnc-EXD1-1 EXD1 CHP1 INO80
GH15J041167 Enhancer 0.6 Ensembl 0.4 +22.9 22864 3.2 IKZF1 CEBPA FOXA2 FOXP1 SPI1 ZNF384 FOXK2 L3MBTL2 CEBPB FOXA3 NDUFAF1 CHAC1 DLL4 SPINT1 RNU6-1169P OIP5-AS1 ZFYVE19 RPAP1 lnc-EXD1-1 HSALNG0105336
GH15J041185 Enhancer 0.4 Ensembl 0.4 +6.8 6764 0.2 EP400 YBX1 CTCF HSALNG0105336 RN7SL497P lnc-EXD1-1 EXD1 CHP1 INO80
GH15J041183 Enhancer 0.2 Ensembl 0.4 +8.3 8265 0.8 NDUFAF1 HSALNG0105336 RN7SL497P lnc-EXD1-1 EXD1 CHP1 INO80
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL497P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RN7SL497P Gene

Latest Assembly
chr15:41,191,965-41,192,265
(GRCh38/hg38)
Size:
301 bases
Orientation:
Minus strand

Previous Assembly
chr15:41,484,163-41,484,463
(GRCh37/hg19 by Entrez Gene)
Size:
301 bases
Orientation:
Minus strand

chr15:41,484,165-41,484,463
(GRCh37/hg19 by Ensembl)
Size:
299 bases
Orientation:
Minus strand

Genomic View for RN7SL497P Gene

Genes around RN7SL497P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL497P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL497P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL497P Gene

Proteins for RN7SL497P Gene

Post-translational modifications for RN7SL497P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL497P Gene

Domains & Families for RN7SL497P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL497P Gene

Function for RN7SL497P Gene

Phenotypes From GWAS Catalog for RN7SL497P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL497P Gene

Localization for RN7SL497P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL497P Gene

Pathways & Interactions for RN7SL497P Gene

PathCards logo

SuperPathways for RN7SL497P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL497P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SL497P Gene

Drugs & Compounds for RN7SL497P Gene

No Compound Related Data Available

Transcripts for RN7SL497P Gene

mRNA/cDNA for RN7SL497P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL497P Gene

No ASD Table

Relevant External Links for RN7SL497P Gene

GeneLoc Exon Structure for
RN7SL497P

Expression for RN7SL497P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL497P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL497P Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with RN7SL497P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL497P Gene

Orthologs for RN7SL497P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL497P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 30
  • 72 (a)
ManyToMany
Species where no ortholog for RN7SL497P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RN7SL497P Gene

ENSEMBL:
Gene Tree for RN7SL497P (if available)
TreeFam:
Gene Tree for RN7SL497P (if available)
Alliance of Genome Resources:
Additional Orthologs for RN7SL497P

Paralogs for RN7SL497P Gene

No data available for Paralogs for RN7SL497P Gene

Variants for RN7SL497P Gene

Additional Variant Information for RN7SL497P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL497P
Leiden Open Variation Database (LOVD)
RN7SL497P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL497P Gene

Disorders for RN7SL497P Gene

No disorders were found for RN7SL497P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL497P Gene

Publications for RN7SL497P Gene

No publications were found for RN7SL497P Gene.

No data available for Mastermind for RN7SL497P Gene

Products for RN7SL497P Gene

Sources for RN7SL497P Gene