Aliases for RN7SL402P Gene

Aliases for RN7SL402P Gene

  • RNA, 7SL, Cytoplasmic 402, Pseudogene 2 3 5
  • RN7SL402P 5

External Ids for RN7SL402P Gene

Previous GeneCards Identifiers for RN7SL402P Gene

  • GC19P036373
  • GC19P036375
  • GC19P035899
  • GC19P037048
  • GC19P037201
  • GC19P037299
  • GC19P037733
  • GC19P035987
  • GC19P036019
  • GC19P036180
  • GC19P036258
  • GC19P036425
  • GC19P036586
  • GC19P036752
  • GC19P036898

Summaries for RN7SL402P Gene

GeneCards Summary for RN7SL402P Gene

RN7SL402P (RNA, 7SL, Cytoplasmic 402, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL402P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL402P Gene

Genomics for RN7SL402P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RN7SL402P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J035879 Enhancer 1.2 Ensembl ENCODE 600.7 -2.0 -1950 1.1 CREB1 GATAD2A PRDM10 ZNF629 REST TFE3 IKZF1 NFKBIZ ZNF692 JUND RF00017-2947 lnc-APLP1-1 RN7SL402P ZNF567 TMEM147-AS1 HAUS5 ZNF850 ZNF345 ZNF566 ZFP14
GH19J035882 Enhancer 1.1 Ensembl ENCODE 600.7 +0.8 810 1.4 ZNF221 CTCF PRDM10 REST ZNF629 ZNF692 ZSCAN4 PKNOX1 RAD21 ZNF501 RF00017-2947 lnc-APLP1-1 RN7SL402P TMEM147-AS1 ZNF567 ZNF345 HAUS5 ZNF850 ZNF790 ZNF790-AS1
GH19J035883 Enhancer 0.5 Ensembl 0.7 +2.4 2411 1.4 POLR2A ZEB1 KLF17 KLF1 ZNF362 ZNF121 ZEB2 lnc-NFKBID-1 piR-45035-105 APLP1 RF00017-2947 lnc-APLP1-1 RN7SL402P NFKBID NPHS1
GH19J035886 Enhancer 0.3 ENCODE 0.7 +3.6 3584 0.2 POLR2A lnc-NFKBID-1 piR-45035-105 RF00017-2947 lnc-APLP1-1 RN7SL402P NFKBID NPHS1
GH19J035885 Enhancer 0.3 ENCODE 0.7 +3.9 3944 0.2 POLR2A lnc-APLP1-2 lnc-NFKBID-1 piR-45035-105 RF00017-2947 lnc-APLP1-1 RN7SL402P NFKBID NPHS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL402P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RN7SL402P Gene

Genomic Locations for RN7SL402P Gene
chr19:35,881,890-35,882,153
(GRCh38/hg38)
Size:
264 bases
Orientation:
Plus strand
chr19:36,372,792-36,373,053
(GRCh37/hg19)
Size:
262 bases
Orientation:
Plus strand

Genomic View for RN7SL402P Gene

Genes around RN7SL402P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL402P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL402P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL402P Gene

Proteins for RN7SL402P Gene

Post-translational modifications for RN7SL402P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL402P Gene

Domains & Families for RN7SL402P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL402P Gene

Function for RN7SL402P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL402P Gene

Localization for RN7SL402P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL402P Gene

Pathways & Interactions for RN7SL402P Gene

PathCards logo

SuperPathways for RN7SL402P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL402P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SL402P Gene

Drugs & Compounds for RN7SL402P Gene

No Compound Related Data Available

Transcripts for RN7SL402P Gene

mRNA/cDNA for RN7SL402P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL402P Gene

No ASD Table

Relevant External Links for RN7SL402P Gene

GeneLoc Exon Structure for
RN7SL402P

Expression for RN7SL402P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL402P Gene

genes like me logo Genes that share expression patterns with RN7SL402P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL402P Gene

Orthologs for RN7SL402P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SL402P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 31
  • 99 (a)
OneToOne
Zebrafish
(Danio rerio)
Actinopterygii Metazoa_SRP 31 31
  • 65 (a)
OneToMany
Species where no ortholog for RN7SL402P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for RN7SL402P Gene

ENSEMBL:
Gene Tree for RN7SL402P (if available)
TreeFam:
Gene Tree for RN7SL402P (if available)

Paralogs for RN7SL402P Gene

No data available for Paralogs for RN7SL402P Gene

Variants for RN7SL402P Gene

Additional Variant Information for RN7SL402P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL402P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL402P Gene

Disorders for RN7SL402P Gene

No disorders were found for RN7SL402P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL402P Gene

Publications for RN7SL402P Gene

No publications were found for RN7SL402P Gene.

No data available for Mastermind for RN7SL402P Gene

Products for RN7SL402P Gene

Sources for RN7SL402P Gene