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Aliases for RN7SL38P Gene

Subcategory (RNA class) for RN7SL38P Gene

SRP

Aliases for RN7SL38P Gene

  • RNA, 7SL, Cytoplasmic 38, Pseudogene 2 3 5

External Ids for RN7SL38P Gene

ORGUL Members for RN7SL38P Gene

Previous GeneCards Identifiers for RN7SL38P Gene

  • GC12P024863

Summaries for RN7SL38P Gene

GeneCards Summary for RN7SL38P Gene

RN7SL38P (RNA, 7SL, Cytoplasmic 38, Pseudogene) is a Pseudogene, and is affiliated with the SRP RNA class.

Additional gene information for RN7SL38P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL38P Gene

Genomics for RN7SL38P Gene

GeneHancer (GH) Regulatory Elements for RN7SL38P Gene

Promoters and enhancers for RN7SL38P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I024705 Enhancer 1.3 FANTOM5 Ensembl ENCODE 550.8 -0.9 -947 0.7 BACH1 BMI1 BATF IRF4 RELA NFATC1 ATF7 ZSCAN29 ETV6 BCLAF1 ENSG00000255745 GC12P024707 RN7SL38P BCAT1
GH12I024709 Enhancer 0.8 FANTOM5 dbSUPER 550.8 +1.7 1735 0.4 HDAC1 MEIS2 ATF1 JUNB ZEB2 TCF12 CTBP1 NFIC HDAC2 FOXK2 GC12P024707 RN7SL38P BCAT1 ENSG00000255745 LOC105369699
GH12I024707 Enhancer 0.5 FANTOM5 dbSUPER 550.8 +0.6 646 0.2 GC12P024707 RN7SL38P BCAT1 ENSG00000255745 LOC105369699
GH12I024708 Enhancer 1.2 FANTOM5 dbSUPER 0.8 +2.6 2563 0.8 HDAC1 PKNOX1 ATF1 TCF12 EGR1 ATF7 FOS IKZF2 RUNX3 CREM BCAT1 ENSG00000255745 RN7SL38P LOC105369699
GH12I024718 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.4 +12.6 12635 1.5 KLF17 MAX EBF1 BATF IRF4 RELA FOSL1 NFATC1 ETV6 IKZF2 ENSG00000255745 BCAT1 RN7SL38P LOC105369699
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SL38P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL38P Gene

Genomic Locations for RN7SL38P Gene
chr12:24,706,788-24,707,083
(GRCh38/hg38)
Size:
296 bases
Orientation:
Plus strand
chr12:24,859,722-24,860,015
(GRCh37/hg19)

Genomic View for RN7SL38P Gene

Genes around RN7SL38P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL38P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL38P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL38P Gene

Proteins for RN7SL38P Gene

Post-translational modifications for RN7SL38P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL38P Gene

Domains & Families for RN7SL38P Gene

Gene Families for RN7SL38P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RN7SL38P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL38P Gene

Function for RN7SL38P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL38P Gene

Localization for RN7SL38P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL38P Gene

Pathways & Interactions for RN7SL38P Gene

SuperPathways for RN7SL38P Gene

No Data Available

Interacting Proteins for RN7SL38P Gene

Gene Ontology (GO) - Biological Process for RN7SL38P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL38P Gene

Drugs & Compounds for RN7SL38P Gene

No Compound Related Data Available

Transcripts for RN7SL38P Gene

mRNA/cDNA for RN7SL38P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL38P Gene

No ASD Table

Relevant External Links for RN7SL38P Gene

GeneLoc Exon Structure for
RN7SL38P
ECgene alternative splicing isoforms for
RN7SL38P

Expression for RN7SL38P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL38P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL38P Gene:

RN7SL38P
genes like me logo Genes that share expression patterns with RN7SL38P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL38P Gene

Orthologs for RN7SL38P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL38P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 34
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL38P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL38P Gene

ENSEMBL:
Gene Tree for RN7SL38P (if available)
TreeFam:
Gene Tree for RN7SL38P (if available)

Paralogs for RN7SL38P Gene

No data available for Paralogs for RN7SL38P Gene

Variants for RN7SL38P Gene

Additional Variant Information for RN7SL38P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL38P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL38P Gene

Disorders for RN7SL38P Gene

No disorders were found for RN7SL38P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL38P Gene

Publications for RN7SL38P Gene

No publications were found for RN7SL38P Gene.

Products for RN7SL38P Gene

Sources for RN7SL38P Gene

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