Aliases for RN7SL370P Gene

Aliases for RN7SL370P Gene

  • RNA, 7SL, Cytoplasmic 370, Pseudogene 2 3 5
  • RN7SL370P 5

External Ids for RN7SL370P Gene

Previous GeneCards Identifiers for RN7SL370P Gene

  • GC01P078113

Summaries for RN7SL370P Gene

GeneCards Summary for RN7SL370P Gene

RN7SL370P (RNA, 7SL, Cytoplasmic 370, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL370P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL370P Gene

Genomics for RN7SL370P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RN7SL370P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J077677 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +36.1 36083 7 ZNF207 IKZF1 MYC ZNF600 ZNF580 ZNF592 ZMYM3 KLF9 POLR2A CEBPA ZZZ3 lnc-USP33-1 FUBP1 RPL17P6 ENSG00000273338 NEXN GIPC2 AK5 DNAJB4 lnc-MIGA1-3
GH01J077655 Enhancer 0.9 Ensembl ENCODE 0.4 +10.3 10304 0.3 ATF2 NFIC HOMEZ FOXA2 SMAD4 RARA JUND FOXP1 SOX5 ZNF189 ZZZ3 HSALNG0004579 RN7SL370P lnc-USP33-1 AK5
GH01J077652 Enhancer 0.5 Ensembl 0.4 +7.4 7376 1.4 ZNF10 EBF1 HNF4A ATF4 ATF3 TRIM24 ZZZ3 USP33 MIGA1 RNA5SP21 ACTG1P21 GIPC2 DNAJB4 HSALNG0004579 RN7SL370P lnc-USP33-1
GH01J077664 Enhancer 0.5 Ensembl 0.4 +19.8 19777 0.6 YY1 SMAD4 PRDM6 MEIS2 PKNOX1 USP33 ACTG1P21 MIGA1 RNA5SP21 ZZZ3 lnc-USP33-1 HSALNG0004579 RN7SL370P AK5
GH01J077671 Enhancer 0.5 ENCODE 0.3 +27.2 27205 1.6 JUND CEBPB ZNF189 PKNOX1 ZBTB20 PRDM1 USP33 AK5 GIPC2 ZZZ3 lnc-USP33-1 HSALNG0004579 RN7SL370P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL370P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RN7SL370P Gene

Latest Assembly
chr1:77,645,324-77,645,618
(GRCh38/hg38)
Size:
295 bases
Orientation:
Plus strand

Previous Assembly
chr1:78,111,009-78,111,303
(GRCh37/hg19 by Entrez Gene)
Size:
295 bases
Orientation:
Plus strand

chr1:78,111,009-78,111,301
(GRCh37/hg19 by Ensembl)
Size:
293 bases
Orientation:
Plus strand

Genomic View for RN7SL370P Gene

Genes around RN7SL370P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL370P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL370P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL370P Gene

Proteins for RN7SL370P Gene

Post-translational modifications for RN7SL370P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL370P Gene

Domains & Families for RN7SL370P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL370P Gene

Function for RN7SL370P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL370P Gene

Localization for RN7SL370P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL370P Gene

Pathways & Interactions for RN7SL370P Gene

PathCards logo

SuperPathways for RN7SL370P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL370P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SL370P Gene

Drugs & Compounds for RN7SL370P Gene

No Compound Related Data Available

Transcripts for RN7SL370P Gene

mRNA/cDNA for RN7SL370P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL370P Gene

No ASD Table

Relevant External Links for RN7SL370P Gene

GeneLoc Exon Structure for
RN7SL370P

Expression for RN7SL370P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL370P Gene

genes like me logo Genes that share expression patterns with RN7SL370P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL370P Gene

Orthologs for RN7SL370P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SL370P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 30
  • 98 (a)
OneToOne
Zebrafish
(Danio rerio)
Actinopterygii Metazoa_SRP 30
  • 72 (a)
ManyToMany
Species where no ortholog for RN7SL370P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for RN7SL370P Gene

ENSEMBL:
Gene Tree for RN7SL370P (if available)
TreeFam:
Gene Tree for RN7SL370P (if available)
Alliance of Genome Resources:
Additional Orthologs for RN7SL370P

Paralogs for RN7SL370P Gene

No data available for Paralogs for RN7SL370P Gene

Variants for RN7SL370P Gene

Additional Variant Information for RN7SL370P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL370P
Leiden Open Variation Database (LOVD)
RN7SL370P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL370P Gene

Disorders for RN7SL370P Gene

No disorders were found for RN7SL370P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL370P Gene

Publications for RN7SL370P Gene

No publications were found for RN7SL370P Gene.

No data available for Mastermind for RN7SL370P Gene

Products for RN7SL370P Gene

Sources for RN7SL370P Gene