Aliases for RN7SL366P Gene

Aliases for RN7SL366P Gene

  • RNA, 7SL, Cytoplasmic 366, Pseudogene 2 3 5

External Ids for RN7SL366P Gene

Previous GeneCards Identifiers for RN7SL366P Gene

  • GC06P164266

Summaries for RN7SL366P Gene

GeneCards Summary for RN7SL366P Gene

RN7SL366P (RNA, 7SL, Cytoplasmic 366, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL366P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL366P Gene

Genomics for RN7SL366P Gene

GeneHancer (GH) Regulatory Elements for RN7SL366P Gene

Promoters and enhancers for RN7SL366P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J163838 Enhancer 0.8 ENCODE CraniofacialAtlas 0.7 -2.8 -2774 1.2 ZIC2 TRIM28 OSR2 MYNN WT1 ZBTB17 TCF7L2 ZFHX2 E2F6 IKZF3 RN7SL366P RF00017-5933 lnc-QKI-9 RF00017-5932 ENSG00000235538
GH06J163859 Enhancer 1 Ensembl ENCODE 0.4 +20.1 20131 1.8 EP300 PHB2 ZBTB5 TRIM28 HES1 MYC CTBP1 TAF9B HDAC3 LEF1 HSALNG0054973 RF00017-5933 RN7SL366P lnc-QKI-9 ENSG00000235538
GH06J163814 Enhancer 0.9 Ensembl ENCODE 0.3 -26.0 -25954 1.6 ZNF217 FOS CTBP1 MYC CTCF ESRRA REST MAX FOSL1 STAT3 RF00017-5933 RN7SL366P lnc-QKI-9 RF00017-5932 ENSG00000235538
GH06J163776 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.2 -63.3 -63260 3 PHB2 ZBTB5 ZBTB11 AFF1 TARDBP REST HES1 TOE1 MYC CTBP1 RF00017-5932 RF00017-5933 RN7SL366P lnc-QKI-9 ENSG00000235538
GH06J163822 Enhancer 0.5 Ensembl 0.4 -19.5 -19460 0.2 EP300 MXI1 GATA3 PBX2 MEIS2 ATF3 GATA2 PKNOX1 RF00017-5933 RN7SL366P lnc-QKI-9 RF00017-5932 ENSG00000235538
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL366P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL366P Gene

Genomic Locations for RN7SL366P Gene
chr6:163,840,561-163,840,852
(GRCh38/hg38)
Size:
292 bases
Orientation:
Plus strand
chr6:164,261,593-164,261,882
(GRCh37/hg19)
Size:
290 bases
Orientation:
Plus strand

Genomic View for RN7SL366P Gene

Genes around RN7SL366P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL366P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL366P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL366P Gene

Proteins for RN7SL366P Gene

Post-translational modifications for RN7SL366P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL366P Gene

Domains & Families for RN7SL366P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL366P Gene

Function for RN7SL366P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL366P Gene

Localization for RN7SL366P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL366P Gene

Pathways & Interactions for RN7SL366P Gene

PathCards logo

SuperPathways for RN7SL366P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RN7SL366P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SL366P Gene

Drugs & Compounds for RN7SL366P Gene

No Compound Related Data Available

Transcripts for RN7SL366P Gene

mRNA/cDNA for RN7SL366P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL366P Gene

No ASD Table

Relevant External Links for RN7SL366P Gene

GeneLoc Exon Structure for
RN7SL366P

Expression for RN7SL366P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL366P Gene

genes like me logo Genes that share expression patterns with RN7SL366P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL366P Gene

Orthologs for RN7SL366P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL366P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 31
  • 98 (a)
OneToOne
Species where no ortholog for RN7SL366P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL366P Gene

ENSEMBL:
Gene Tree for RN7SL366P (if available)
TreeFam:
Gene Tree for RN7SL366P (if available)

Paralogs for RN7SL366P Gene

No data available for Paralogs for RN7SL366P Gene

Variants for RN7SL366P Gene

Additional Variant Information for RN7SL366P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL366P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL366P Gene

Disorders for RN7SL366P Gene

No disorders were found for RN7SL366P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL366P Gene

Publications for RN7SL366P Gene

No publications were found for RN7SL366P Gene.

No data available for Mastermind for RN7SL366P Gene

Products for RN7SL366P Gene

Sources for RN7SL366P Gene