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Aliases for RN7SL32P Gene

Subcategory (RNA class) for RN7SL32P Gene

lncRNA

Aliases for RN7SL32P Gene

  • RNA, 7SL, Cytoplasmic 32, Pseudogene 2 3 5

External Ids for RN7SL32P Gene

ORGUL Members for RN7SL32P Gene

Previous GeneCards Identifiers for RN7SL32P Gene

  • GC02P234115

Summaries for RN7SL32P Gene

GeneCards Summary for RN7SL32P Gene

RN7SL32P (RNA, 7SL, Cytoplasmic 32, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SL32P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SL32P Gene

Genomics for RN7SL32P Gene

GeneHancer (GH) Regulatory Elements for RN7SL32P Gene

Promoters and enhancers for RN7SL32P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J233201 Enhancer 0.8 Ensembl ENCODE 0.7 -2.5 -2498 2.6 ZNF687 IKZF1 IKZF2 ZNF140 ELF1 POLR2A EBF1 ATF2 NFATC1 ENSG00000251485 USP40 SCARNA6 INPP5D RN7SL32P
GH02J233179 Enhancer 1.1 Ensembl ENCODE 0.3 -23.7 -23714 10.6 CBFA2T2 CEBPG ZNF687 SP1 ZNF384 ZNF639 IKZF1 RXRA CREB1 IKZF2 SCARNA6 GIGYF2 USP40 ATG16L1 INPP5D ENSG00000251485 SCARNA5 EEF1B2P7 KCNJ13 RN7SL32P
GH02J233163 Enhancer 1 Ensembl ENCODE 0.3 -40.0 -39963 3.7 CDC5L MCM2 EGR1 RFX1 NFRKB ZNF316 SOX6 POLR2A ZSCAN5C MAX INPP5D GIGYF2 RN7SL32P
GH02J233059 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.1 -143.3 -143257 5.8 SP1 ELF3 CTCF MNT NKRF CEBPG RERE POLR2A ZNF687 ZNF24 INPP5D NEU2 NGEF ATG16L1 RN7SL32P
GH02J233072 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.1 -124.1 -124059 16.9 SP1 CEBPG ZNF687 ZNF24 JUND RELA SP5 CREM MLLT1 ZNF384 INPP5D ATG16L1 NGEF SCARNA6 GIGYF2 DGKD RN7SL32P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL32P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL32P Gene

Genomic Locations for RN7SL32P Gene
chr2:233,205,199-233,205,479
(GRCh38/hg38)
Size:
281 bases
Orientation:
Plus strand
chr2:234,113,845-234,114,121
(GRCh37/hg19)
Size:
277 bases
Orientation:
Plus strand

Genomic View for RN7SL32P Gene

Genes around RN7SL32P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL32P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL32P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL32P Gene

Proteins for RN7SL32P Gene

Post-translational modifications for RN7SL32P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL32P Gene

Domains & Families for RN7SL32P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RN7SL32P Gene

Function for RN7SL32P Gene

Phenotypes From GWAS Catalog for RN7SL32P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL32P Gene

Localization for RN7SL32P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL32P Gene

Pathways & Interactions for RN7SL32P Gene

PathCards logo

SuperPathways for RN7SL32P Gene

No Data Available

Interacting Proteins for RN7SL32P Gene

Gene Ontology (GO) - Biological Process for RN7SL32P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL32P Gene

Drugs & Compounds for RN7SL32P Gene

No Compound Related Data Available

Transcripts for RN7SL32P Gene

mRNA/cDNA for RN7SL32P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL32P Gene

No ASD Table

Relevant External Links for RN7SL32P Gene

GeneLoc Exon Structure for
RN7SL32P
ECgene alternative splicing isoforms for
RN7SL32P

Expression for RN7SL32P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL32P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL32P Gene

This gene is overexpressed in Whole Blood (x10.7), Spleen (x8.5), and Small Intestine - Terminal Ileum (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of RN7SL32P Gene:

RN7SL32P
genes like me logo Genes that share expression patterns with RN7SL32P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL32P Gene

Orthologs for RN7SL32P Gene

Evolution for RN7SL32P Gene

ENSEMBL:
Gene Tree for RN7SL32P (if available)
TreeFam:
Gene Tree for RN7SL32P (if available)

No data available for Orthologs for RN7SL32P Gene

Paralogs for RN7SL32P Gene

No data available for Paralogs for RN7SL32P Gene

Variants for RN7SL32P Gene

Additional Variant Information for RN7SL32P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL32P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL32P Gene

Disorders for RN7SL32P Gene

No disorders were found for RN7SL32P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL32P Gene

Publications for RN7SL32P Gene

No publications were found for RN7SL32P Gene.

Products for RN7SL32P Gene

Sources for RN7SL32P Gene

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