Aliases for RN7SL146P Gene

Aliases for RN7SL146P Gene

  • RNA, 7SL, Cytoplasmic 146, Pseudogene 2 3 5

External Ids for RN7SL146P Gene

Previous GeneCards Identifiers for RN7SL146P Gene

  • GC19M016652

Summaries for RN7SL146P Gene

GeneCards Summary for RN7SL146P Gene

RN7SL146P (RNA, 7SL, Cytoplasmic 146, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL146P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL146P Gene

Genomics for RN7SL146P Gene

GeneHancer (GH) Regulatory Elements for RN7SL146P Gene

Promoters and enhancers for RN7SL146P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J016538 Enhancer 0.2 Ensembl 750.6 +1.3 1283 0.2 RF00017-2867 RN7SL146P lnc-SLC35E1-2 CHERP piR-61945-248 ENSG00000141979
GH19J016539 Enhancer 0.2 Ensembl 750.6 +0.7 683 0.2 RF00017-2867 RN7SL146P lnc-SLC35E1-2 CHERP piR-61945-248 ENSG00000141979
GH19J016568 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12.4 -32.2 -32207 7.6 E2F8 SP1 ZBTB40 SREBF1 SIX5 ZBTB6 SMARCE1 RBPJ POLR2A ATF1 ENSG00000279529 LOC105372295 SLC35E1 CHERP ENSG00000268743 SIN3B ENSG00000269578 C19orf44 TMEM38A PLVAP
GH19J016593 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -54.5 -54490 2.1 ETV6 RELA MLLT1 ZNF687 ZBED1 IKZF1 ZIC2 BACH1 TRIM22 IKZF2 C19orf44 SLC35E1 CHERP RN7SL146P ENSG00000141979 MED26 KLF2 ENSG00000269578 ENSG00000268087 lnc-MED26-4
GH19J016611 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 11.8 -72.1 -72062 1.7 FOXA1 ZBTB6 ZNF148 SP1 RXRA JUND ATF3 GABPA ZFHX2 CEBPG ENSG00000268087 ENSG00000279977 C19orf44 CALR3 SLC35E1 CHERP RN7SL146P SMIM7 TMEM38A EPS15L1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL146P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SL146P Gene

Genomic Locations for RN7SL146P Gene
chr19:16,539,688-16,539,984
(GRCh38/hg38)
Size:
297 bases
Orientation:
Minus strand
chr19:16,650,499-16,650,795
(GRCh37/hg19)
Size:
297 bases
Orientation:
Minus strand

Genomic View for RN7SL146P Gene

Genes around RN7SL146P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL146P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL146P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SL146P Gene

Proteins for RN7SL146P Gene

Post-translational modifications for RN7SL146P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL146P Gene

Domains & Families for RN7SL146P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL146P Gene

Function for RN7SL146P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL146P Gene

Localization for RN7SL146P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL146P Gene

Pathways & Interactions for RN7SL146P Gene

PathCards logo

SuperPathways for RN7SL146P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL146P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SL146P Gene

Drugs & Compounds for RN7SL146P Gene

No Compound Related Data Available

Transcripts for RN7SL146P Gene

mRNA/cDNA for RN7SL146P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL146P Gene

No ASD Table

Relevant External Links for RN7SL146P Gene

GeneLoc Exon Structure for
RN7SL146P
ECgene alternative splicing isoforms for
RN7SL146P

Expression for RN7SL146P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SL146P Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SL146P Gene:

RN7SL146P
genes like me logo Genes that share expression patterns with RN7SL146P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL146P Gene

Orthologs for RN7SL146P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL146P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Metazoa_SRP 33
  • 99 (a)
OneToOne
Species where no ortholog for RN7SL146P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SL146P Gene

ENSEMBL:
Gene Tree for RN7SL146P (if available)
TreeFam:
Gene Tree for RN7SL146P (if available)

Paralogs for RN7SL146P Gene

No data available for Paralogs for RN7SL146P Gene

Variants for RN7SL146P Gene

Additional Variant Information for RN7SL146P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL146P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL146P Gene

Disorders for RN7SL146P Gene

No disorders were found for RN7SL146P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SL146P Gene

Publications for RN7SL146P Gene

No publications were found for RN7SL146P Gene.

No data available for External Links for RN7SL146P Gene

Products for RN7SL146P Gene

Sources for RN7SL146P Gene