RN7SL130P Gene (Pseudogene)

RNA, 7SL, Cytoplasmic 130, Pseudogene

GC01P063655
GIFtS:
6
See more...

Aliases for RN7SL130P Gene

Aliases for RN7SL130P Gene

  • RNA, 7SL, Cytoplasmic 130, Pseudogene 2 3 5
  • RN7SL130P 5

External Ids for RN7SL130P Gene

Previous GeneCards Identifiers for RN7SL130P Gene

  • GC01P064123

Summaries for RN7SL130P Gene

GeneCards Summary for RN7SL130P Gene

RN7SL130P (RNA, 7SL, Cytoplasmic 130, Pseudogene) is a Pseudogene.

Additional gene information for RN7SL130P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SL130P Gene

Genomics for RN7SL130P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RN7SL130P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J063639 Enhancer 1 Ensembl ENCODE 5.4 -13.8 -13811 4.9 CEBPA KDM6A FOXA2 RXRA ETV4 RARA ZNF843 DMAP1 ZBTB33 BCL6 ROR1 RN7SL130P PGM1 RF00005-010 HSALNG0004128 ITGB3BP
GH01J063651 Enhancer 0.6 Ensembl ENCODE 7.2 -4.4 -4442 1.8 RAD51 JUND USF2 PKNOX1 ROR1 RN7SL130P HSALNG0004128 RF00005-010 ITGB3BP PGM1
GH01J064320 Enhancer 0.4 Ensembl 5.4 +664.8 664758 1.4 MYC MAX HNF4A HNF4G RN7SL130P UBE2U lnc-UBE2U-1 piR-33432-015 MK280269-003 CACHD1
GH01J064315 Enhancer 0.4 Ensembl 5.2 +660.3 660258 0.4 EGR2 ZBTB17 PRDM10 ZFHX2 RN7SL130P UBE2U lnc-UBE2U-1 piR-33432-015 MK280269-003 CACHD1
GH01J064291 Enhancer 0.3 Ensembl 5.6 +636.7 636658 1.6 FOS CEBPB RN7SL130P AK4 piR-33432-015 lnc-UBE2U-1 UBE2U MK280269-003 CACHD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SL130P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RN7SL130P Gene

Latest Assembly
chr1:63,655,743-63,656,047
(GRCh38/hg38)
Size:
305 bases
Orientation:
Plus strand

Previous Assembly
chr1:64,121,414-64,121,718
(GRCh37/hg19 by Entrez Gene)
Size:
305 bases
Orientation:
Plus strand

chr1:64,121,414-64,121,716
(GRCh37/hg19 by Ensembl)
Size:
303 bases
Orientation:
Plus strand

Genomic View for RN7SL130P Gene

Genes around RN7SL130P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SL130P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SL130P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RN7SL130P Gene

Proteins for RN7SL130P Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for RN7SL130P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SL130P Gene

Domains & Families for RN7SL130P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SL130P Gene

Function for RN7SL130P Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for RN7SL130P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SL130P Gene

Localization for RN7SL130P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SL130P Gene

Pathways & Interactions for RN7SL130P Gene

PathCards logo

SuperPathways for RN7SL130P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RN7SL130P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SL130P Gene

Drugs & Compounds for RN7SL130P Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for RN7SL130P Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for RN7SL130P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SL130P Gene

No ASD Table

Relevant External Links for RN7SL130P Gene

GeneLoc Exon Structure for
RN7SL130P

Expression for RN7SL130P Gene

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  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SL130P Gene

mRNA expression in normal human tissues for RN7SL130P Gene
mRNA expression by GTEx for RN7SL130P Gene

mRNA differential expression in normal tissues according to GTEx for RN7SL130P Gene

This gene is overexpressed in Liver (x5.4).
genes like me logo Genes that share expression patterns with RN7SL130P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SL130P Gene

Orthologs for RN7SL130P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SL130P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
 Mammalia Metazoa_SRP 31
  • 97 (a)
 OneToOne
Species where no ortholog for RN7SL130P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RN7SL130P Gene

ENSEMBL:
Gene Tree for RN7SL130P (if available)
TreeFam:
Gene Tree for RN7SL130P (if available)

Paralogs for RN7SL130P Gene

No data available for Paralogs for RN7SL130P Gene

Variants for RN7SL130P Gene

Additional Variant Information for RN7SL130P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SL130P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SL130P Gene

Disorders for RN7SL130P Gene

Additional Disease Information for RN7SL130P

Open Targets Platform
Open Targets Platform

No disorders were found for RN7SL130P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RN7SL130P Gene

Publications for RN7SL130P Gene

No publications were found for RN7SL130P Gene.

ExternalLinks

View latest publications for RN7SL130P gene in Mastermind

Products for RN7SL130P Gene

Sources for RN7SL130P Gene