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Aliases for RN7SKP92 Gene

Subcategory (RNA class) for RN7SKP92 Gene

lncRNA

Aliases for RN7SKP92 Gene

  • RNA, 7SK Small Nuclear Pseudogene 92 2 3 5

External Ids for RN7SKP92 Gene

ORGUL Members for RN7SKP92 Gene

Previous GeneCards Identifiers for RN7SKP92 Gene

  • GC14P101147
  • GC14P101192
  • GC14P101175
  • GC14P101355
  • GC14P102035
  • GC14P102288
  • GC14P102464
  • GC14P102637
  • GC14P102805
  • GC14P102984

Summaries for RN7SKP92 Gene

GeneCards Summary for RN7SKP92 Gene

RN7SKP92 (RNA, 7SK Small Nuclear Pseudogene 92) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SKP92 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP92 Gene

Genomics for RN7SKP92 Gene

GeneHancer (GH) Regulatory Elements for RN7SKP92 Gene

Promoters and enhancers for RN7SKP92 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J100486 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 650.7 -1.1 -1105 0.6 ARID4B SIN3A FEZF1 ZNF2 ZNF48 ZNF143 ATF7 RUNX3 JUNB MXD4 RN7SKP92 MIR337 MIR127 MIR136 MIR433 RTL1 MIR431 MIR493 GC14P103466 GC14M100431
GH14J100495 Enhancer 0.8 dbSUPER 0.4 +13.0 12956 10.5 HDAC1 NFIB ZSCAN4 ZNF133 ZNF143 FOS EGR2 ZNF184 GLIS1 ZNF8 BEGAIN WDR25 RN7SKP92 GC14P103477 GC14M100431
GH14J100532 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +46.3 46259 2.7 MAX ZIC2 RAD21 ZFHX2 POLR2A EGR1 VEZF1 SCRT2 HNF4G EGR2 BEGAIN GC14M100431 GC14P103477 RN7SKP92
GH14J100520 Enhancer 0.7 dbSUPER 0.3 +35.8 35838 6.3 BCOR CTCF ZMYM3 FEZF1 ZIC2 RAD21 ZNF335 ZFHX2 ARID2 SMC3 BEGAIN YY1 WARS GC14P103477 GC14M100431 RN7SKP92 WDR25
GH14J100511 Enhancer 0.3 dbSUPER 0.3 +24.1 24059 0.9 ZNF366 BEGAIN RN7SKP92 GC14P103477 GC14M100431 WDR25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SKP92 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SKP92 Gene

Genomic Locations for RN7SKP92 Gene
chr14:100,487,544-100,487,787
(GRCh38/hg38)
Size:
244 bases
Orientation:
Plus strand
chr14:100,953,881-100,954,124
(GRCh37/hg19)
Size:
244 bases
Orientation:
Plus strand

Genomic View for RN7SKP92 Gene

Genes around RN7SKP92 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP92 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP92 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP92 Gene

Function for RN7SKP92 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP92 Gene

Localization for RN7SKP92 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SKP92 Gene

Pathways & Interactions for RN7SKP92 Gene

SuperPathways for RN7SKP92 Gene

No Data Available

Interacting Proteins for RN7SKP92 Gene

Gene Ontology (GO) - Biological Process for RN7SKP92 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP92 Gene

Drugs & Compounds for RN7SKP92 Gene

No Compound Related Data Available

Transcripts for RN7SKP92 Gene

mRNA/cDNA for RN7SKP92 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP92 Gene

No ASD Table

Relevant External Links for RN7SKP92 Gene

GeneLoc Exon Structure for
RN7SKP92
ECgene alternative splicing isoforms for
RN7SKP92

Expression for RN7SKP92 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP92 Gene

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP92 Gene:

RN7SKP92
genes like me logo Genes that share expression patterns with RN7SKP92: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP92 Gene

Orthologs for RN7SKP92 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RN7SKP92 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 34
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 7SK 34
  • 52 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24436 34
  • 36 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii 7SK 34
  • 52 (a)
OneToMany
Species where no ortholog for RN7SKP92 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RN7SKP92 Gene

ENSEMBL:
Gene Tree for RN7SKP92 (if available)
TreeFam:
Gene Tree for RN7SKP92 (if available)

Paralogs for RN7SKP92 Gene

No data available for Paralogs for RN7SKP92 Gene

Variants for RN7SKP92 Gene

Additional Variant Information for RN7SKP92 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP92

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP92 Gene

Disorders for RN7SKP92 Gene

No disorders were found for RN7SKP92 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP92 Gene

Publications for RN7SKP92 Gene

No publications were found for RN7SKP92 Gene.

Products for RN7SKP92 Gene

Sources for RN7SKP92 Gene

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