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Aliases for RN7SKP26 Gene

Subcategory (RNA class) for RN7SKP26 Gene

lncRNA

Aliases for RN7SKP26 Gene

  • RNA, 7SK Small Nuclear Pseudogene 26 2 3 5

External Ids for RN7SKP26 Gene

ORGUL Members for RN7SKP26 Gene

Previous GeneCards Identifiers for RN7SKP26 Gene

  • GC18M043571

Summaries for RN7SKP26 Gene

GeneCards Summary for RN7SKP26 Gene

RN7SKP26 (RNA, 7SK Small Nuclear Pseudogene 26) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RN7SKP26 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP26 Gene

Genomics for RN7SKP26 Gene

GeneHancer (GH) Regulatory Elements for RN7SKP26 Gene

Promoters and enhancers for RN7SKP26 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J046096 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.2 -107.9 -107903 2.9 PKNOX1 ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF207 ZNF143 ATP5F1A GC18P046096 HAUS1 RNY4P37 PSTPIP2 RN7SKP26 EPG5
GH18J045973 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.6 15630 1 ELF3 ARNT RAD21 RFX5 SLC30A9 ZNF143 DEK ZNF362 ZNF654 RXRA EPG5 PSTPIP2 RN7SKP26
GH18J045997 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.6 -8550 2.3 HDAC1 TEAD4 TAL1 EBF1 TCF12 CTBP1 ZNF766 NCOR1 VEZF1 CBFA2T2 EPG5 HAUS1 SLC14A2 RNF165 RN7SKP26 LOC100422497 PSTPIP2
GH18J046008 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.5 -19543 1.8 RXRA TEAD4 TAL1 CBFA2T3 EP300 RAD21 TCF12 NCOR1 CBFA2T2 HNF4A PSTPIP2 EPG5 RNY4P37 SLC14A2 RN7SKP26 LOC100422497
GH18J045993 Enhancer 0.6 ENCODE 0.7 -3.9 -3877 1.6 JUN CEBPB MNT EP300 RFX5 JUND GATA3 ZNF629 CREB1 CUX1 EPG5 RN7SKP26 LOC100422497 PSTPIP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RN7SKP26 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SKP26 Gene

Genomic Locations for RN7SKP26 Gene
chr18:45,989,653-45,989,945
(GRCh38/hg38)
Size:
293 bases
Orientation:
Minus strand
chr18:43,569,619-43,569,911
(GRCh37/hg19)
Size:
293 bases
Orientation:
Minus strand

Genomic View for RN7SKP26 Gene

Genes around RN7SKP26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP26 Gene

Function for RN7SKP26 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP26 Gene

Localization for RN7SKP26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SKP26 Gene

Pathways & Interactions for RN7SKP26 Gene

SuperPathways for RN7SKP26 Gene

No Data Available

Interacting Proteins for RN7SKP26 Gene

Gene Ontology (GO) - Biological Process for RN7SKP26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP26 Gene

Drugs & Compounds for RN7SKP26 Gene

No Compound Related Data Available

Transcripts for RN7SKP26 Gene

mRNA/cDNA for RN7SKP26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP26 Gene

No ASD Table

Relevant External Links for RN7SKP26 Gene

GeneLoc Exon Structure for
RN7SKP26
ECgene alternative splicing isoforms for
RN7SKP26

Expression for RN7SKP26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP26 Gene

mRNA differential expression in normal tissues according to GTEx for RN7SKP26 Gene

This gene is overexpressed in Whole Blood (x10.5) and Spleen (x7.0).

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP26 Gene:

RN7SKP26
genes like me logo Genes that share expression patterns with RN7SKP26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP26 Gene

Orthologs for RN7SKP26 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RN7SKP26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 34
  • 83 (a)
OneToOne
Species where no ortholog for RN7SKP26 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP26 Gene

ENSEMBL:
Gene Tree for RN7SKP26 (if available)
TreeFam:
Gene Tree for RN7SKP26 (if available)

Paralogs for RN7SKP26 Gene

No data available for Paralogs for RN7SKP26 Gene

Variants for RN7SKP26 Gene

Additional Variant Information for RN7SKP26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP26 Gene

Disorders for RN7SKP26 Gene

No disorders were found for RN7SKP26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP26 Gene

Publications for RN7SKP26 Gene

No publications were found for RN7SKP26 Gene.

Products for RN7SKP26 Gene

Sources for RN7SKP26 Gene

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