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Aliases for RN7SKP23 Gene

Subcategory (RNA class) for RN7SKP23 Gene

antisense

Aliases for RN7SKP23 Gene

  • RNA, 7SK Small Nuclear Pseudogene 23 2 3 5

External Ids for RN7SKP23 Gene

ORGUL Members for RN7SKP23 Gene

Previous GeneCards Identifiers for RN7SKP23 Gene

  • GC16M023425
  • GC00U936252

Summaries for RN7SKP23 Gene

GeneCards Summary for RN7SKP23 Gene

RN7SKP23 (RNA, 7SK Small Nuclear Pseudogene 23) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RN7SKP23 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RN7SKP23 Gene

Genomics for RN7SKP23 Gene

GeneHancer (GH) Regulatory Elements for RN7SKP23 Gene

Promoters and enhancers for RN7SKP23 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J023408 Enhancer 1.1 FANTOM5 ENCODE 0.7 -3.4 -3366 1.2 ZNF473 ZSCAN4 INSM2 KLF17 FEZF1 ZNF2 ZEB1 GATA2 ZNF366 ZSCAN5C ENSG00000260482 DCTN5 PALB2 NPIPB5 COG7 ENSG00000260136 RN7SKP23 GC16M023275
GH16J023403 Enhancer 0.9 ENCODE dbSUPER 0.4 -8.7 -8674 1.1 PKNOX1 NFIB FEZF1 LCORL GATA3 POLR2A MAFK TCF7L2 NFIA GFI1B COG7 GGA2 RN7SKP23 GC16M023275
GH16J023410 Enhancer 0.5 ENCODE 0.7 -2.0 -2025 0.1 SCRT1 SCRT2 FEZF1 ZIC2 SCNN1B RN7SKP23 COG7 GC16M023275
GH16J023335 Enhancer 1 ENCODE dbSUPER 0.2 -76.1 -76111 0.8 HDGF PKNOX1 SMAD1 STAT5A BMI1 BATF KLF5 IRF4 ZNF207 ZNF143 SCNN1B GC16M023275 RN7SKP23
GH16J023365 Enhancer 0.9 FANTOM5 dbSUPER 0.2 -46.5 -46466 0.4 ZNF687 HLF GFI1B JUNB DPF2 OSR2 ZNF512 IKZF1 EED PRDM10 SCNN1B RN7SKP23 GC16M023275
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SKP23 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SKP23 Gene

Genomic Locations for RN7SKP23 Gene
chr16:23,412,380-23,416,680
(GRCh38/hg38)
Size:
4,301 bases
Orientation:
Plus strand
chr16:23,424,905-23,425,197
(GRCh37/hg19)
Size:
293 bases
Orientation:
Minus strand

Genomic View for RN7SKP23 Gene

Genes around RN7SKP23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP23 Gene

Function for RN7SKP23 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP23 Gene

Localization for RN7SKP23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SKP23 Gene

Pathways & Interactions for RN7SKP23 Gene

SuperPathways for RN7SKP23 Gene

No Data Available

Interacting Proteins for RN7SKP23 Gene

Gene Ontology (GO) - Biological Process for RN7SKP23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RN7SKP23 Gene

Drugs & Compounds for RN7SKP23 Gene

No Compound Related Data Available

Transcripts for RN7SKP23 Gene

mRNA/cDNA for RN7SKP23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP23 Gene

No ASD Table

Relevant External Links for RN7SKP23 Gene

GeneLoc Exon Structure for
RN7SKP23
ECgene alternative splicing isoforms for
RN7SKP23

Expression for RN7SKP23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RN7SKP23 Gene

mRNA differential expression in normal tissues according to GTEx for RN7SKP23 Gene

This gene is overexpressed in Brain - Cerebellum (x6.9) and Brain - Cerebellar Hemisphere (x6.4).

NURSA nuclear receptor signaling pathways regulating expression of RN7SKP23 Gene:

RN7SKP23
genes like me logo Genes that share expression patterns with RN7SKP23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP23 Gene

Orthologs for RN7SKP23 Gene

Evolution for RN7SKP23 Gene

ENSEMBL:
Gene Tree for RN7SKP23 (if available)
TreeFam:
Gene Tree for RN7SKP23 (if available)

No data available for Orthologs for RN7SKP23 Gene

Paralogs for RN7SKP23 Gene

No data available for Paralogs for RN7SKP23 Gene

Variants for RN7SKP23 Gene

Additional Variant Information for RN7SKP23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP23 Gene

Disorders for RN7SKP23 Gene

Additional Disease Information for RN7SKP23

No disorders were found for RN7SKP23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RN7SKP23 Gene

Publications for RN7SKP23 Gene

No publications were found for RN7SKP23 Gene.

Products for RN7SKP23 Gene

Sources for RN7SKP23 Gene

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