Aliases for RN7SKP202 Gene

Aliases for RN7SKP202 Gene

  • RN7SK Pseudogene 202 2 3 5
  • RNA, 7SK Small Nuclear Pseudogene 202 2 3

External Ids for RN7SKP202 Gene

Previous GeneCards Identifiers for RN7SKP202 Gene

  • GC10P069918

Summaries for RN7SKP202 Gene

GeneCards Summary for RN7SKP202 Gene

RN7SKP202 (RN7SK Pseudogene 202) is a Pseudogene.

Additional gene information for RN7SKP202 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RN7SKP202 Gene

Genomics for RN7SKP202 Gene

GeneHancer (GH) Regulatory Elements for RN7SKP202 Gene

Promoters and enhancers for RN7SKP202 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J068158 Enhancer 0.2 dbSUPER 500.7 +1.1 1146 0.8 RN7SKP202 lnc-HNRNPH3-4 MYPN piR-30853-012
GH10J068150 Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 6.8 -3.4 -3443 7.5 FOXK2 ZNF217 CTCF ZSCAN5C TCF12 USF1 JUND TEAD4 FOS ZNF639 MYPN SIRT1 HERC4 ATOH7 LINC02640 HNRNPH3 RN7SKP202 DNA2 PBLD lnc-HERC4-2
GH10J068160 Enhancer 0.5 ENCODE dbSUPER 0.7 +2.5 2480 0.2 MITF ZNF362 RN7SKP202 lnc-HNRNPH3-4 MYPN piR-30853-012
GH10J068163 Enhancer 0.7 ENCODE 0.4 +6.0 5965 0.8 TRIM22 FOXA2 ARNT MEF2B NBN NR2C1 JUND BATF ELF1 IRF4 MYPN ATOH7 LINC02640 HERC4 RN7SKP202 lnc-HNRNPH3-4 piR-30853-012
GH10J068162 Enhancer 0.4 Ensembl dbSUPER 0.7 +2.0 2022 0.2 ZNF362 MYPN RN7SKP202 lnc-HNRNPH3-4 piR-30853-012
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RN7SKP202 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RN7SKP202 Gene

Genomic Locations for RN7SKP202 Gene
chr10:68,158,079-68,158,408
(GRCh38/hg38)
Size:
330 bases
Orientation:
Plus strand
chr10:69,917,836-69,918,165
(GRCh37/hg19)
Size:
330 bases
Orientation:
Plus strand

Genomic View for RN7SKP202 Gene

Genes around RN7SKP202 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RN7SKP202 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RN7SKP202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RN7SKP202 Gene

Proteins for RN7SKP202 Gene

Post-translational modifications for RN7SKP202 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RN7SKP202 Gene

Domains & Families for RN7SKP202 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RN7SKP202 Gene

Function for RN7SKP202 Gene

Phenotypes From GWAS Catalog for RN7SKP202 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RN7SKP202 Gene

Localization for RN7SKP202 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RN7SKP202 Gene

Pathways & Interactions for RN7SKP202 Gene

PathCards logo

SuperPathways for RN7SKP202 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RN7SKP202 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RN7SKP202 Gene

Drugs & Compounds for RN7SKP202 Gene

No Compound Related Data Available

Transcripts for RN7SKP202 Gene

mRNA/cDNA for RN7SKP202 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RN7SKP202 Gene

No ASD Table

Relevant External Links for RN7SKP202 Gene

GeneLoc Exon Structure for
RN7SKP202

Expression for RN7SKP202 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RN7SKP202 Gene

mRNA differential expression in normal tissues according to GTEx for RN7SKP202 Gene

This gene is overexpressed in Heart - Atrial Appendage (x27.8), Muscle - Skeletal (x11.0), Heart - Left Ventricle (x9.6), and Testis (x4.5).
genes like me logo Genes that share expression patterns with RN7SKP202: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RN7SKP202 Gene

Orthologs for RN7SKP202 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RN7SKP202 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia 7SK 31
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia 7SK 31
  • 65 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22793 31
  • 54 (a)
OneToMany
Species where no ortholog for RN7SKP202 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RN7SKP202 Gene

ENSEMBL:
Gene Tree for RN7SKP202 (if available)
TreeFam:
Gene Tree for RN7SKP202 (if available)

Paralogs for RN7SKP202 Gene

No data available for Paralogs for RN7SKP202 Gene

Variants for RN7SKP202 Gene

Additional Variant Information for RN7SKP202 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RN7SKP202

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RN7SKP202 Gene

Disorders for RN7SKP202 Gene

No disorders were found for RN7SKP202 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RN7SKP202 Gene

Publications for RN7SKP202 Gene

No publications were found for RN7SKP202 Gene.

No data available for Mastermind for RN7SKP202 Gene

Products for RN7SKP202 Gene

Sources for RN7SKP202 Gene