Aliases for RMRPP5 Gene

Aliases for RMRPP5 Gene

  • RNA Component Of Mitochondrial RNA Processing Endoribonuclease Pseudogene 5 2 3 5

External Ids for RMRPP5 Gene

Summaries for RMRPP5 Gene

GeneCards Summary for RMRPP5 Gene

RMRPP5 (RNA Component Of Mitochondrial RNA Processing Endoribonuclease Pseudogene 5) is a Pseudogene.

Additional gene information for RMRPP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RMRPP5 Gene

Genomics for RMRPP5 Gene

GeneHancer (GH) Regulatory Elements for RMRPP5 Gene

Promoters and enhancers for RMRPP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J024910 Enhancer 0.2 Ensembl 0.7 +4.9 4932 0.4 RMRPP5 lnc-IFT74-10 HSALNG0070470
GH09J024939 Enhancer 0.3 Ensembl 0.3 +34.1 34132 0.8 RCOR1 SMARCA4 RMRPP5 lnc-IFT74-10 HSALNG0070470
GH09J024920 Enhancer 0.2 FANTOM5 0.4 +15.4 15374 0.3 RMRPP5 lnc-IFT74-10 HSALNG0070470
GH09J025003 Enhancer 0.5 Ensembl 0.2 +98.3 98332 0.8 TEAD4 CTCF RXRA TCF12 RAD21 ZNF143 KDM1A HSALNG0070470 RMRPP5 lnc-IFT74-10
GH09J024881 Enhancer 0.2 Ensembl 0.4 -24.0 -23968 1 piR-39858-647 RMRPP5 lnc-IFT74-10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RMRPP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RMRPP5 Gene

Genomic Locations for RMRPP5 Gene
chr9:24,905,469-24,905,735
(GRCh38/hg38)
Size:
267 bases
Orientation:
Plus strand
chr9:24,905,467-24,905,733
(GRCh37/hg19)
Size:
267 bases
Orientation:
Plus strand

Genomic View for RMRPP5 Gene

Genes around RMRPP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RMRPP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RMRPP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RMRPP5 Gene

Proteins for RMRPP5 Gene

Post-translational modifications for RMRPP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RMRPP5 Gene

Domains & Families for RMRPP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RMRPP5 Gene

Function for RMRPP5 Gene

Phenotypes From GWAS Catalog for RMRPP5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RMRPP5 Gene

Localization for RMRPP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RMRPP5 Gene

Pathways & Interactions for RMRPP5 Gene

PathCards logo

SuperPathways for RMRPP5 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RMRPP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RMRPP5 Gene

Drugs & Compounds for RMRPP5 Gene

No Compound Related Data Available

Transcripts for RMRPP5 Gene

mRNA/cDNA for RMRPP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RMRPP5 Gene

No ASD Table

Relevant External Links for RMRPP5 Gene

GeneLoc Exon Structure for
RMRPP5

Expression for RMRPP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RMRPP5 Gene

genes like me logo Genes that share expression patterns with RMRPP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RMRPP5 Gene

Orthologs for RMRPP5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RMRPP5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RNase_MRP 31
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RNase_MRP 31
  • 62 (a)
OneToMany
dog
(Canis familiaris)
Mammalia RNase_MRP 31
  • 62 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Rmrp 31
  • 60 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia RNase_MRP 31 31 31 31
  • 56 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia RNase_MRP 31
  • 51 (a)
OneToMany
chicken
(Gallus gallus)
Aves RNase_MRP 31
  • 48 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia RNase_MRP 31
  • 45 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii RNase_MRP 31
  • 50 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea RNase_MRP 31
  • 40 (a)
OneToMany
Species where no ortholog for RMRPP5 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RMRPP5 Gene

ENSEMBL:
Gene Tree for RMRPP5 (if available)
TreeFam:
Gene Tree for RMRPP5 (if available)

Paralogs for RMRPP5 Gene

No data available for Paralogs for RMRPP5 Gene

Variants for RMRPP5 Gene

Additional Variant Information for RMRPP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RMRPP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RMRPP5 Gene

Disorders for RMRPP5 Gene

No disorders were found for RMRPP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RMRPP5 Gene

Publications for RMRPP5 Gene

No publications were found for RMRPP5 Gene.

No data available for Mastermind for RMRPP5 Gene

Products for RMRPP5 Gene

Sources for RMRPP5 Gene