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Aliases for RIMKLBP1 Gene

Aliases for RIMKLBP1 Gene

  • Ribosomal Modification Protein RimK Like Family Member B Pseudogene 1 2 3 5
  • Ribosomal Modification Protein RimK-Like Family Member B2 2 3
  • Family With Sequence Similarity 80, Member B2 2 3
  • Ribosomal Modification Protein RimK-Like (E. Coli) Pseudogene 2
  • Ribosomal Modification Protein RimK-Like Pseudogene 3
  • FAM80B2 3
  • RIMKLB2 3
  • FAM80C 3
  • RIMKLP 3

External Ids for RIMKLBP1 Gene

Previous HGNC Symbols for RIMKLBP1 Gene

  • FAM80C
  • RIMKLP
  • FAM80B2
  • RIMKLB2

Previous GeneCards Identifiers for RIMKLBP1 Gene

  • GC21P037423

Summaries for RIMKLBP1 Gene

GeneCards Summary for RIMKLBP1 Gene

RIMKLBP1 (Ribosomal Modification Protein RimK Like Family Member B Pseudogene 1) is a Pseudogene.

Additional gene information for RIMKLBP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RIMKLBP1 Gene

Genomics for RIMKLBP1 Gene

GeneHancer (GH) Regulatory Elements for RIMKLBP1 Gene

Promoters and enhancers for RIMKLBP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J036697 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 45.1 +650.9 650932 7 ZNF473 HDGF ZSCAN21 MYC ZBTB7A YY1 SP7 SP5 KLF14 PRDM1 SIM2 ENSG00000224269 SETD4 ENSG00000242553 RIMKLBP1 TTC3-AS1 TTC3 DSCR9 MORC3
GH21J036155 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 43.3 +106.7 106741 3.4 HDGF ZFX SP1 NKRF ZNF121 POLR2A ZSCAN21 NCOA6 YY1 SP7 DOP1B SETD4 RIMKLBP1 CBR3 MORC3 LINC01436 CBR1 RPL3P1 CBR3-AS1
GH21J036132 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 21 +84.3 84341 5.8 ZNF121 ZNF384 ZSCAN21 MYC ZBTB7A YY1 SP7 POLR2A SP1 ZNF548 CBR3 SETD4 DOP1B MORC3 RIMKLBP1 TTC3 RPL23AP3 LINC01436 CBR1 ENSG00000228107
GH21J035586 Enhancer 0.9 Ensembl 46.3 -463.6 -463559 2 ZNF121 ZSCAN21 SP7 SP1 KLF14 ZNF488 ZBTB8A ZIC2 ZEB2 ZNF639 RIMKLBP1 SETD4 PPP1R2P2 LOC100506403 EZH2P1 RUNX1
GH21J036068 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 17 +20.3 20340 3 SP1 ZNF121 ZNF687 ZSCAN21 MAFK YY1 TRIM24 SP7 POLR2A SP5 CBR1 SETD4 RIMKLBP1 LINC01436 ENSG00000233393 LOC100133286
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RIMKLBP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RIMKLBP1 Gene

Genomic Locations for RIMKLBP1 Gene
chr21:36,050,160-36,052,187
(GRCh38/hg38)
Size:
2,028 bases
Orientation:
Plus strand
chr21:37,422,358-37,424,397
(GRCh37/hg19)
Size:
2,040 bases
Orientation:
Plus strand

Genomic View for RIMKLBP1 Gene

Genes around RIMKLBP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RIMKLBP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RIMKLBP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RIMKLBP1 Gene

Proteins for RIMKLBP1 Gene

Post-translational modifications for RIMKLBP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RIMKLBP1 Gene

Domains & Families for RIMKLBP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RIMKLBP1 Gene

Function for RIMKLBP1 Gene

Phenotypes From GWAS Catalog for RIMKLBP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RIMKLBP1 Gene

Localization for RIMKLBP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RIMKLBP1 Gene

Pathways & Interactions for RIMKLBP1 Gene

PathCards logo

SuperPathways for RIMKLBP1 Gene

No Data Available

Interacting Proteins for RIMKLBP1 Gene

Gene Ontology (GO) - Biological Process for RIMKLBP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RIMKLBP1 Gene

Drugs & Compounds for RIMKLBP1 Gene

No Compound Related Data Available

Transcripts for RIMKLBP1 Gene

mRNA/cDNA for RIMKLBP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RIMKLBP1 Gene

No ASD Table

Relevant External Links for RIMKLBP1 Gene

GeneLoc Exon Structure for
RIMKLBP1
ECgene alternative splicing isoforms for
RIMKLBP1

Expression for RIMKLBP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RIMKLBP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RIMKLBP1 Gene:

RIMKLBP1
genes like me logo Genes that share expression patterns with RIMKLBP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RIMKLBP1 Gene

Orthologs for RIMKLBP1 Gene

Evolution for RIMKLBP1 Gene

ENSEMBL:
Gene Tree for RIMKLBP1 (if available)
TreeFam:
Gene Tree for RIMKLBP1 (if available)

No data available for Orthologs for RIMKLBP1 Gene

Paralogs for RIMKLBP1 Gene

No data available for Paralogs for RIMKLBP1 Gene

Variants for RIMKLBP1 Gene

Additional Variant Information for RIMKLBP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RIMKLBP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RIMKLBP1 Gene

Disorders for RIMKLBP1 Gene

No disorders were found for RIMKLBP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RIMKLBP1 Gene

Publications for RIMKLBP1 Gene

  1. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3 58

Products for RIMKLBP1 Gene

Sources for RIMKLBP1 Gene

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