Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RHPN1-AS1 Gene

Subcategory (RNA class) for RHPN1-AS1 Gene


Quality Score for this RNA gene is


Aliases for RHPN1-AS1 Gene

  • RHPN1 Antisense RNA 1 (Head To Head) 2 3 5
  • RHPN1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • RHPN1 Antisense RNA 1 2 4
  • C8orf51 3 4
  • Chromosome 8 Open Reading Frame 51 2
  • RHPN1 Antisense Gene Protein 1 4

External Ids for RHPN1-AS1 Gene

ORGUL Members for RHPN1-AS1 Gene

Previous HGNC Symbols for RHPN1-AS1 Gene

  • C8orf51

Previous GeneCards Identifiers for RHPN1-AS1 Gene

  • GC08M144449

Summaries for RHPN1-AS1 Gene

GeneCards Summary for RHPN1-AS1 Gene

RHPN1-AS1 (RHPN1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RHPN1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RHPN1-AS1 Gene

Genomics for RHPN1-AS1 Gene

GeneHancer (GH) Regulatory Elements for RHPN1-AS1 Gene

Promoters and enhancers for RHPN1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I143367 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -0.3 -304 3.1 PKNOX1 ATF1 ARNT ARID4B NEUROD1 SIN3A DMAP1 ZBTB7B ETS1 POLR2B RHPN1 RHPN1-AS1 TOP1MT SHARPIN HSF1 ZNF707 MINCR GC08M143377
GH08I143366 Enhancer 0.2 ENCODE 550.8 +1.7 1749 0.2 RHPN1 RHPN1-AS1 PIR36498
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RHPN1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RHPN1-AS1 Gene

Genomic Locations for RHPN1-AS1 Gene
2,013 bases
Minus strand

Genomic View for RHPN1-AS1 Gene

Genes around RHPN1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RHPN1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RHPN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RHPN1-AS1 Gene

Proteins for RHPN1-AS1 Gene

  • Protein details for RHPN1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein encoded by RHPN1-AS1
    Protein Accession:

    Protein attributes for RHPN1-AS1 Gene

    59 amino acids
    Molecular mass:
    6658 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RHPN1-AS1 Gene

Post-translational modifications for RHPN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RHPN1-AS1 Gene

Domains & Families for RHPN1-AS1 Gene

Protein Domains for RHPN1-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RHPN1-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RHPN1-AS1 Gene

Function for RHPN1-AS1 Gene

Gene Ontology (GO) - Molecular Function for RHPN1-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with RHPN1-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RHPN1-AS1 Gene

Localization for RHPN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RHPN1-AS1 Gene

Pathways & Interactions for RHPN1-AS1 Gene

SuperPathways for RHPN1-AS1 Gene

No Data Available

Interacting Proteins for RHPN1-AS1 Gene

Selected Interacting proteins: Q9BWJ2-RHAS1_HUMAN for RHPN1-AS1 Gene via IID UniProtKB

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for RHPN1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RHPN1-AS1 Gene

Drugs & Compounds for RHPN1-AS1 Gene

No Compound Related Data Available

Transcripts for RHPN1-AS1 Gene

mRNA/cDNA for RHPN1-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(19) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RHPN1-AS1 Gene

RHPN1 antisense RNA 1 (head to head):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RHPN1-AS1 Gene

No ASD Table

Relevant External Links for RHPN1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RHPN1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RHPN1-AS1 Gene

SOURCE GeneReport for Unigene cluster for RHPN1-AS1 Gene:

genes like me logo Genes that share expression patterns with RHPN1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RHPN1-AS1 Gene

Orthologs for RHPN1-AS1 Gene

Evolution for RHPN1-AS1 Gene

Gene Tree for RHPN1-AS1 (if available)
Gene Tree for RHPN1-AS1 (if available)

No data available for Orthologs for RHPN1-AS1 Gene

Paralogs for RHPN1-AS1 Gene

No data available for Paralogs for RHPN1-AS1 Gene

Variants for RHPN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for RHPN1-AS1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000829922 -- 143,368,763(-) C/T upstream_transcript_variant
rs1000944052 -- 143,368,616(-) C/A non_coding_transcript_variant
rs1000983908 -- 143,366,356(-) G/A downstream_transcript_variant
rs1001532407 -- 143,367,121(-) G/A non_coding_transcript_variant
rs1001681492 -- 143,366,262(-) G/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for RHPN1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3619106 CNV gain 21293372
esv3619107 CNV gain 21293372
nsv470247 CNV loss 18288195
nsv612765 CNV loss 21841781
nsv824761 CNV gain 20364138
nsv950012 CNV deletion 24416366

Additional Variant Information for RHPN1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RHPN1-AS1 Gene

Disorders for RHPN1-AS1 Gene

Additional Disease Information for RHPN1-AS1

No disorders were found for RHPN1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RHPN1-AS1 Gene

Publications for RHPN1-AS1 Gene

  1. The Long Non-Coding RNA RHPN1-AS1 Promotes Uveal Melanoma Progression. (PMID: 28124977) Lu L … Fan X (International journal of molecular sciences 2017) 2 3 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 58
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for RHPN1-AS1 Gene

Sources for RHPN1-AS1 Gene

Loading form....