RFPL4AP6 Gene (Pseudogene)

Ret Finger Protein Like 4A Pseudogene 6

GC22P029432
GIFtS:
4
See more...

Aliases for RFPL4AP6 Gene

Aliases for RFPL4AP6 Gene

  • Ret Finger Protein Like 4A Pseudogene 6 2 3 5
  • RFPL4AP6 5

External Ids for RFPL4AP6 Gene

Previous GeneCards Identifiers for RFPL4AP6 Gene

  • GC22P029830

Summaries for RFPL4AP6 Gene

GeneCards Summary for RFPL4AP6 Gene

RFPL4AP6 (Ret Finger Protein Like 4A Pseudogene 6) is a Pseudogene.

Additional gene information for RFPL4AP6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RFPL4AP6 Gene

Genomics for RFPL4AP6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RFPL4AP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH22J029432 Enhancer 0.3 Ensembl ENCODE 600.7 -0.9 -944 2 RFPL4AP6 RFPL1S NIPSNAP1 ENSG00000242156 AP1B1 RFPL1 NEFH L13304-023
GH22J029423 Promoter/Enhancer 0.6 EPDnew Ensembl 0.4 -9.6 -9643 0.6 CBFA2T3 AP1B1 ENSG00000242156 RFPL1 RFPL1S THOC5 RFPL4AP6 NEFH L13304-023
GH22J029443 Enhancer 0.5 Ensembl 0.4 +11.0 10957 1 PRDM10 ZNF341 ZBTB40 ZNF366 ZFP37 RFPL1S THOC5 NIPSNAP1 MTFP1 FJ601684-298 RFPL4AP6 AP1B1 NEFH L13304-023
GH22J029441 Promoter 0.3 EPDnew 0.4 +8.7 8719 0.1 RFPL1S FJ601684-298 RFPL4AP6 AP1B1 NEFH RFPL1 L13304-023
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RFPL4AP6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RFPL4AP6 Gene

Genomic Locations for RFPL4AP6 Gene
chr22:29,432,944-29,435,005
(GRCh38/hg38)
Size:
2,062 bases
Orientation:
Plus strand
chr22:29,829,330-29,830,945
(GRCh37/hg19)
Size:
1,616 bases
Orientation:
Plus strand

Genomic View for RFPL4AP6 Gene

Genes around RFPL4AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RFPL4AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RFPL4AP6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RFPL4AP6 Gene

Proteins for RFPL4AP6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RFPL4AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RFPL4AP6 Gene

Domains & Families for RFPL4AP6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RFPL4AP6 Gene

Function for RFPL4AP6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RFPL4AP6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RFPL4AP6 Gene

Localization for RFPL4AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RFPL4AP6 Gene

Pathways & Interactions for RFPL4AP6 Gene

PathCards logo

SuperPathways for RFPL4AP6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RFPL4AP6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RFPL4AP6 Gene

Drugs & Compounds for RFPL4AP6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RFPL4AP6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RFPL4AP6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RFPL4AP6 Gene

No ASD Table

Relevant External Links for RFPL4AP6 Gene

GeneLoc Exon Structure for
RFPL4AP6

Expression for RFPL4AP6 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RFPL4AP6 Gene

Orthologs for RFPL4AP6 Gene

Evolution for RFPL4AP6 Gene

ENSEMBL:
Gene Tree for RFPL4AP6 (if available)
TreeFam:
Gene Tree for RFPL4AP6 (if available)

No data available for Orthologs for RFPL4AP6 Gene

Paralogs for RFPL4AP6 Gene

No data available for Paralogs for RFPL4AP6 Gene

Variants for RFPL4AP6 Gene

Additional Variant Information for RFPL4AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RFPL4AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RFPL4AP6 Gene

Disorders for RFPL4AP6 Gene

No disorders were found for RFPL4AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RFPL4AP6 Gene

Publications for RFPL4AP6 Gene

No publications were found for RFPL4AP6 Gene.

No data available for Mastermind for RFPL4AP6 Gene

Products for RFPL4AP6 Gene

Sources for RFPL4AP6 Gene