Aliases for RF01383 Gene

Data sources for RF01383 Gene:

RNA type for RF01383 Gene

sRNA

Aliases for RF01383 Gene

No data available for External Ids for RF01383 Gene

Summaries for RF01383 Gene

GeneCards Summary for RF01383 Gene

RF01383 is an RNA Gene, and is affiliated with the sRNA class.

Rfam classification for RF01383 Gene

  • GRIK4 3 prime UTR element

Additional gene information for RF01383 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF01383 Gene

Genomics for RF01383 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF01383 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J120985 Promoter/Enhancer 0.9 ENCODE CraniofacialAtlas 250.7 -0.4 -366 0.8 EZH2 GABPB1 CTCF HNF4A NRF1 ZFX XRCC5 PATZ1 GLIS2 TCF12 RF01383 GRIK4 HSALNG0087721 TBCEL
GH11J120986 Enhancer 0.6 ENCODE 250.7 +0.1 149 0.2 EZH2 CTCF HNF4A ZFX XRCC5 ZNF512 GLIS2 TCF12 RAD21 GABPA RF01383 TBCEL GRIK4
GH11J121005 Enhancer 0.3 Ensembl ENCODE 0.4 +17.8 17843 1.4 TECTA TBCEL RF01383 GRIK4
GH11J120976 Enhancer 0.2 ENCODE 0.4 -8.4 -8362 2.4 TECTA RF01383 HSALNG0087721 TBCEL GRIK4
GH11J120993 Enhancer 0.2 Ensembl 0.4 +7.6 7643 0.6 TBCEL TECTA RF01383 GRIK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF01383 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF01383 Gene

Latest Assembly
chr11:120,986,258-120,986,353
(GRCh38/hg38)
Size:
96 bases
Orientation:
Plus strand

Genomic View for RF01383 Gene

Genes around RF01383 on UCSC Golden Path with GeneCards custom track
RF01383 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF01383 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF01383 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF01383 Gene

Proteins for RF01383 Gene

Post-translational modifications for RF01383 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF01383 Gene

Domains & Families for RF01383 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF01383 Gene

Function for RF01383 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF01383 Gene

Localization for RF01383 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF01383 Gene

Pathways & Interactions for RF01383 Gene

PathCards logo

SuperPathways for RF01383 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF01383 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF01383 Gene

Drugs & Compounds for RF01383 Gene

No Compound Related Data Available

Transcripts for RF01383 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF01383 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00007206BB_9606 sRNA 96 1

Rfam: RF01383,

URS0001BBED67_9606 sRNA 96 1

Rfam: RF01383,

URS0001BC3BE7_9606 sRNA 96 1

Rfam: RF01383,

URS0001BC1C12_9606 sRNA 82 1

Rfam: RF01383,

URS0001BC72EC_9606 sRNA 82 1

Rfam: RF01383,

RF01383 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF01383 Gene

No ASD Table

Relevant External Links for RF01383 Gene

GeneLoc Exon Structure for
RF01383

No data available for mRNA/cDNA for RF01383 Gene

Expression for RF01383 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF01383 Gene

Orthologs for RF01383 Gene

No data available for Orthologs and Evolution for RF01383 Gene

Paralogs for RF01383 Gene

No data available for Paralogs for RF01383 Gene

Variants for RF01383 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF01383 Gene

Disorders for RF01383 Gene

No disorders were found for RF01383 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF01383 Gene

Publications for RF01383 Gene

No publications were found for RF01383 Gene.

No data available for Mastermind for RF01383 Gene

Products for RF01383 Gene

Sources for RF01383 Gene