Aliases for RF00998-084 Gene

Subcategory (RNA class) for RF00998-084 Gene

miRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00998-084 Gene

No data available for External Ids for RF00998-084 Gene

Summaries for RF00998-084 Gene

GeneCards Summary for RF00998-084 Gene

RF00998-084 is an RNA Gene, and is affiliated with the miRNA class.

Rfam classification for RF00998-084 Gene

Additional gene information for RF00998-084 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00998-084 Gene

Genomics for RF00998-084 Gene

GeneHancer (GH) Regulatory Elements for RF00998-084 Gene

Promoters and enhancers for RF00998-084 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J050091 Enhancer 0.5 Ensembl dbSUPER 500.7 +0.3 269 0.4 ZNF140 ARID3A RF00998-084 SNAI1 RNU6-147P piR-55985-114 lnc-SNAI1-3 lnc-TMEM189-UBE2V1-4 UBE2V1 TMEM189-UBE2V1
GH20J050098 Enhancer 1 ENCODE dbSUPER 0.7 -4.8 -4829 0.2 PHB2 ZBTB5 MYC CTBP1 HDAC3 NCOR1 MBD2 TRIM25 NFIC ARNT RF00017-3625 SNAI1 RNU6-147P RF00998-084 lnc-TMEM189-UBE2V1-4 UBE2V1 TMEM189-UBE2V1
GH20J050097 Enhancer 0.8 dbSUPER 0.7 -4.1 -4070 1.2 ZBTB5 MYC HDAC3 NCOR1 SIN3A MBD2 TRIM25 ARNT ZNF592 PBX2 SNAI1 RNU6-147P RF00017-3625 RF00998-084 lnc-TMEM189-UBE2V1-4 UBE2V1 TMEM189-UBE2V1
GH20J050095 Enhancer 0.5 Ensembl dbSUPER 0.7 -2.4 -2430 0.6 RBM22 CREB1 SNAI1 RNU6-147P RF00017-3625 RF00998-084 lnc-TMEM189-UBE2V1-4 UBE2V1 TMEM189-UBE2V1
GH20J050096 Promoter 0.3 EPDnew 0.7 -3.1 -3084 0.1 TMEM189-UBE2V1 SNAI1 RNU6-147P RF00017-3625 RF00998-084 lnc-TMEM189-UBE2V1-4 UBE2V1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00998-084 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00998-084 Gene

Genomic Locations for RF00998-084 Gene
chr20:50,093,570-50,093,670
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for RF00998-084 Gene

Genes around RF00998-084 on UCSC Golden Path with GeneCards custom track

RF00998-084 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00998-084 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00998-084 Gene

Proteins for RF00998-084 Gene

Post-translational modifications for RF00998-084 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00998-084 Gene

Domains & Families for RF00998-084 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00998-084 Gene

Function for RF00998-084 Gene

miRNA for RF00998-084 Gene

miRTarBase miRNAs that target RF00998-084

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00998-084 Gene

Localization for RF00998-084 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00998-084 Gene

Pathways & Interactions for RF00998-084 Gene

PathCards logo

SuperPathways for RF00998-084 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00998-084 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00998-084 Gene

Drugs & Compounds for RF00998-084 Gene

No Compound Related Data Available

Transcripts for RF00998-084 Gene

mRNA/cDNA for RF00998-084 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00998-084 Gene

No ASD Table

Relevant External Links for RF00998-084 Gene

GeneLoc Exon Structure for
RF00998-084

Expression for RF00998-084 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00998-084 Gene

Orthologs for RF00998-084 Gene

No data available for Orthologs and Evolution for RF00998-084 Gene

Paralogs for RF00998-084 Gene

No data available for Paralogs for RF00998-084 Gene

Variants for RF00998-084 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00998-084 Gene

Disorders for RF00998-084 Gene

No disorders were found for RF00998-084 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00998-084 Gene

Publications for RF00998-084 Gene

No publications were found for RF00998-084 Gene.

No data available for Mastermind for RF00998-084 Gene

Products for RF00998-084 Gene

Sources for RF00998-084 Gene