Aliases for RF00994-398 Gene

Subcategory (RNA class) for RF00994-398 Gene

miRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00994-398 Gene

No data available for External Ids for RF00994-398 Gene

Summaries for RF00994-398 Gene

GeneCards Summary for RF00994-398 Gene

RF00994-398 is an RNA Gene, and is affiliated with the miRNA class.

Rfam classification for RF00994-398 Gene

Additional gene information for RF00994-398 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00994-398 Gene

Genomics for RF00994-398 Gene

GeneHancer (GH) Regulatory Elements for RF00994-398 Gene

Promoters and enhancers for RF00994-398 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J037787 Enhancer 1 FANTOM5 Ensembl ENCODE 0.7 +2.3 2347 3.9 TCF12 TEAD1 USF1 U2AF1 NR3C1 ZFHX2 ZNF664 RXRA JUND MAX HNF1B RF00994-398 ENSG00000275173 lnc-HNF1B-3
GH17J037791 Enhancer 0.8 FANTOM5 ENCODE 0.4 +5.4 5444 0.3 CTCF TEAD4 REST MYC RAD21 TRIM22 NFYB SMC3 YY1 EHMT2 HNF1B RF00994-398 ENSG00000275173 lnc-HNF1B-3
GH17J037792 Enhancer 0.6 Ensembl ENCODE 0.4 +6.8 6790 1 EP300 USF1 FOS GATA3 POLR2A HNF1B DDX52 ENSG00000275173 RF00994-398 lnc-HNF1B-3
GH17J037793 Enhancer 0.6 ENCODE 0.4 +5.2 5228 0.2 CTCF TEAD4 REST MYC YY1 EHMT2 ELF1 IKZF1 RB1 TBX21 HNF1B RF00994-398 ENSG00000275173 lnc-HNF1B-3
GH17J037799 Enhancer 0.5 Ensembl 0.4 +13.9 13885 0.4 RELA IKZF1 SPI1 ZBTB33 IKZF2 EED RELB HNF1B ENSG00000275173 RF00994-398 LOC105371757 lnc-HNF1B-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00994-398 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00994-398 Gene

Genomic Locations for RF00994-398 Gene
chr17:37,786,116-37,786,181
(GRCh38/hg38)
Size:
66 bases
Orientation:
Plus strand

Genomic View for RF00994-398 Gene

Genes around RF00994-398 on UCSC Golden Path with GeneCards custom track

RF00994-398 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00994-398 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00994-398 Gene

Proteins for RF00994-398 Gene

Post-translational modifications for RF00994-398 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00994-398 Gene

Domains & Families for RF00994-398 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00994-398 Gene

Function for RF00994-398 Gene

miRNA for RF00994-398 Gene

miRTarBase miRNAs that target RF00994-398

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00994-398 Gene

Localization for RF00994-398 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00994-398 Gene

Pathways & Interactions for RF00994-398 Gene

PathCards logo

SuperPathways for RF00994-398 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00994-398 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00994-398 Gene

Drugs & Compounds for RF00994-398 Gene

No Compound Related Data Available

Transcripts for RF00994-398 Gene

mRNA/cDNA for RF00994-398 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00994-398 Gene

No ASD Table

Relevant External Links for RF00994-398 Gene

GeneLoc Exon Structure for
RF00994-398

Expression for RF00994-398 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00994-398 Gene

Orthologs for RF00994-398 Gene

No data available for Orthologs and Evolution for RF00994-398 Gene

Paralogs for RF00994-398 Gene

No data available for Paralogs for RF00994-398 Gene

Variants for RF00994-398 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00994-398 Gene

Disorders for RF00994-398 Gene

No disorders were found for RF00994-398 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00994-398 Gene

Publications for RF00994-398 Gene

No publications were found for RF00994-398 Gene.

No data available for Mastermind for RF00994-398 Gene

Products for RF00994-398 Gene

Sources for RF00994-398 Gene