Aliases for RF00100-015 Gene

Subcategory (RNA class) for RF00100-015 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00100-015 Gene

No data available for External Ids for RF00100-015 Gene

Summaries for RF00100-015 Gene

GeneCards Summary for RF00100-015 Gene

RF00100-015 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00100-015 Gene

Additional gene information for RF00100-015 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00100-015 Gene

Genomics for RF00100-015 Gene

GeneHancer (GH) Regulatory Elements for RF00100-015 Gene

Promoters and enhancers for RF00100-015 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J017483 Enhancer 0.5 Ensembl 500.7 -0.6 -592 0.6 FOS ZFHX2 GLIS1 EGR2 ZNF121 PRDM1 RF00100-015 piR-34920-002 ST8SIA6 HACD1
GH10J017473 Enhancer 1 Ensembl ENCODE 0.4 +9.2 9219 1.4 ZSCAN5C GTF2E2 RFX1 USF2 CTBP1 NCOR1 NEUROD1 TRIM25 POLR2A ZKSCAN1 LOC105376437 HACD1 ST8SIA6 RF00100-015
GH10J017479 Enhancer 0.6 Ensembl 0.7 +2.7 2708 0.4 KDM4B PBX2 IKZF1 NFATC3 TBX21 MEIS2 PBX3 SPI1 ATF7 BHLHE40 ST8SIA6 RF00100-015 LOC105376437
GH10J017475 Enhancer 0.7 Ensembl 0.4 +6.9 6909 2.4 CTCF GTF2E2 REST RELA MEF2C SMC3 BCL11A ZBTB17 NR3C1 IRF1 HACD1 ST8SIA6 LOC105376437 RF00100-015
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00100-015 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00100-015 Gene

Genomic Locations for RF00100-015 Gene
chr10:17,482,400-17,482,709
(GRCh38/hg38)
Size:
310 bases
Orientation:
Minus strand

Genomic View for RF00100-015 Gene

Genes around RF00100-015 on UCSC Golden Path with GeneCards custom track

RF00100-015 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00100-015 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00100-015 Gene

Proteins for RF00100-015 Gene

Post-translational modifications for RF00100-015 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00100-015 Gene

Domains & Families for RF00100-015 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00100-015 Gene

Function for RF00100-015 Gene

miRNA for RF00100-015 Gene

miRTarBase miRNAs that target RF00100-015

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00100-015 Gene

Localization for RF00100-015 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00100-015 Gene

Pathways & Interactions for RF00100-015 Gene

PathCards logo

SuperPathways for RF00100-015 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00100-015 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00100-015 Gene

Drugs & Compounds for RF00100-015 Gene

No Compound Related Data Available

Transcripts for RF00100-015 Gene

mRNA/cDNA for RF00100-015 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00100-015 Gene

No ASD Table

Relevant External Links for RF00100-015 Gene

GeneLoc Exon Structure for
RF00100-015

Expression for RF00100-015 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00100-015 Gene

Orthologs for RF00100-015 Gene

No data available for Orthologs and Evolution for RF00100-015 Gene

Paralogs for RF00100-015 Gene

No data available for Paralogs for RF00100-015 Gene

Variants for RF00100-015 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00100-015 Gene

Disorders for RF00100-015 Gene

No disorders were found for RF00100-015 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00100-015 Gene

Publications for RF00100-015 Gene

No publications were found for RF00100-015 Gene.

No data available for Mastermind for RF00100-015 Gene

Products for RF00100-015 Gene

Sources for RF00100-015 Gene