Aliases for RF00066-157 Gene

Subcategory (RNA class) for RF00066-157 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00066-157 Gene

No data available for External Ids for RF00066-157 Gene

Summaries for RF00066-157 Gene

GeneCards Summary for RF00066-157 Gene

RF00066-157 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-157 Gene

Additional gene information for RF00066-157 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-157 Gene

Genomics for RF00066-157 Gene

GeneHancer (GH) Regulatory Elements for RF00066-157 Gene

Promoters and enhancers for RF00066-157 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J134576 Enhancer 1.2 Ensembl ENCODE dbSUPER 500.7 +0.9 909 2.6 CTCF JUND TEAD4 GABPA AFF1 REST DNMT1 ZBTB25 RAD21 TRIM22 RF00066-157 SEC24A SAR1B CATSPER3 TXNDC15 lnc-SEC24A-1 JADE2 RF00017-4893
GH05J134566 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +9.2 9189 4.4 RFX1 MXI1 NR2F2 CEBPB JUN SPI1 USF1 FOSL1 JUND FOS ENSG00000248559 ENSG00000243648 CDKN2AIPNL CAMLG LINC01843 TXNDC15 RF00066-157 lnc-SEC24A-1 JADE2 RF00017-4893
GH05J134578 Enhancer 0.7 Ensembl dbSUPER 0.7 -2.7 -2711 2.6 CTCF NR2F2 FOS RAD21 RXRA AGO2 POLR2A CAMLG RF00066-157 piR-35967-008 JADE2 RF00017-4893
GH05J134586 Enhancer 1 ENCODE dbSUPER 0.4 -9.0 -9006 1.6 CTCF ZIC2 REST RAD21 CTBP1 TRIM22 SMC3 HDAC2 ZNF384 ZNF263 TXNDC15 ENSG00000248559 piR-35967-008 RF00066-157 RF00017-4893
GH05J134582 Enhancer 0.6 UCNEbase dbSUPER 0.7 -4.7 -4704 0.2 ZNF316 RF00066-157 piR-35967-008 JADE2 RF00017-4893
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-157 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00066-157 Gene

Genomic Locations for RF00066-157 Gene
chr5:134,578,131-134,578,190
(GRCh38/hg38)
Size:
60 bases
Orientation:
Minus strand

Genomic View for RF00066-157 Gene

Genes around RF00066-157 on UCSC Golden Path with GeneCards custom track

RF00066-157 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-157 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-157 Gene

Proteins for RF00066-157 Gene

Post-translational modifications for RF00066-157 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-157 Gene

Domains & Families for RF00066-157 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-157 Gene

Function for RF00066-157 Gene

Phenotypes From GWAS Catalog for RF00066-157 Gene

miRNA for RF00066-157 Gene

miRTarBase miRNAs that target RF00066-157

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00066-157 Gene

Localization for RF00066-157 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-157 Gene

Pathways & Interactions for RF00066-157 Gene

PathCards logo

SuperPathways for RF00066-157 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00066-157 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00066-157 Gene

Drugs & Compounds for RF00066-157 Gene

No Compound Related Data Available

Transcripts for RF00066-157 Gene

mRNA/cDNA for RF00066-157 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-157 Gene

No ASD Table

Relevant External Links for RF00066-157 Gene

GeneLoc Exon Structure for
RF00066-157

Expression for RF00066-157 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-157 Gene

Orthologs for RF00066-157 Gene

No data available for Orthologs and Evolution for RF00066-157 Gene

Paralogs for RF00066-157 Gene

No data available for Paralogs for RF00066-157 Gene

Variants for RF00066-157 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-157 Gene

Disorders for RF00066-157 Gene

No disorders were found for RF00066-157 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-157 Gene

Publications for RF00066-157 Gene

No publications were found for RF00066-157 Gene.

No data available for Mastermind for RF00066-157 Gene

Products for RF00066-157 Gene

Sources for RF00066-157 Gene