Aliases for RF00066-138 Gene

Subcategory (RNA class) for RF00066-138 Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for RF00066-138 Gene

No data available for External Ids for RF00066-138 Gene

Summaries for RF00066-138 Gene

GeneCards Summary for RF00066-138 Gene

RF00066-138 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-138 Gene

Additional gene information for RF00066-138 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-138 Gene

Genomics for RF00066-138 Gene

GeneHancer (GH) Regulatory Elements for RF00066-138 Gene

Promoters and enhancers for RF00066-138 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J003079 Promoter/Enhancer 1.2 Ensembl ENCODE 500.7 -1.7 -1655 2.3 ZBTB11 AFF1 MYC CTBP1 HDAC3 BCL11A NCOR1 MBD2 NFIC MYNN RF00066-138 RNU7-33P piR-54764-465 HTT
GH04J003078 Promoter 0.6 Ensembl 500.7 -0.4 -358 0.2 NBN NR2F1 ZNF217 NKRF MLLT1 RF00066-138 RNU7-33P piR-54764-465 HTT
GH04J003073 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +2.9 2870 6.1 RXRA HNRNPK EP300 SIN3A NRF1 POLR2G SP1 NCOR1 PHF8 ZFX HTT-AS HTT 5MWI_A-129 MSANTD1 DOK7 NOP14-AS1 RF00066-138 RNU7-33P
GH04J003083 Enhancer 0.7 ENCODE 0.7 -4.6 -4606 0.2 NCOR1 PBX2 BCOR TAL1 STAT5A TCF12 DPF2 NR2F6 MEIS2 ID3 RNU6-204P RF00066-138 piR-54764-465 HTT
GH04J003084 Enhancer 0.8 ENCODE 0.4 -6.8 -6753 2.9 EP300 CTBP1 BCL11A ESRRA TCF12 NBN SMARCA5 BATF IRF4 IKZF1 RNU6-204P MSANTD1 NOP14-AS1 RF00066-138 piR-54764-465 HTT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-138 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00066-138 Gene

Genomic Locations for RF00066-138 Gene
chr4:3,078,482-3,078,543
(GRCh38/hg38)
Size:
62 bases
Orientation:
Minus strand

Genomic View for RF00066-138 Gene

Genes around RF00066-138 on UCSC Golden Path with GeneCards custom track

RF00066-138 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-138 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-138 Gene

Proteins for RF00066-138 Gene

Post-translational modifications for RF00066-138 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-138 Gene

Domains & Families for RF00066-138 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-138 Gene

Function for RF00066-138 Gene

miRNA for RF00066-138 Gene

miRTarBase miRNAs that target RF00066-138

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RF00066-138 Gene

Localization for RF00066-138 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-138 Gene

Pathways & Interactions for RF00066-138 Gene

PathCards logo

SuperPathways for RF00066-138 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RF00066-138 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00066-138 Gene

Drugs & Compounds for RF00066-138 Gene

No Compound Related Data Available

Transcripts for RF00066-138 Gene

mRNA/cDNA for RF00066-138 Gene

1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-138 Gene

No ASD Table

Relevant External Links for RF00066-138 Gene

GeneLoc Exon Structure for
RF00066-138

Expression for RF00066-138 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-138 Gene

Orthologs for RF00066-138 Gene

No data available for Orthologs and Evolution for RF00066-138 Gene

Paralogs for RF00066-138 Gene

No data available for Paralogs for RF00066-138 Gene

Variants for RF00066-138 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-138 Gene

Disorders for RF00066-138 Gene

No disorders were found for RF00066-138 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-138 Gene

Publications for RF00066-138 Gene

No publications were found for RF00066-138 Gene.

No data available for Mastermind for RF00066-138 Gene

Products for RF00066-138 Gene

Sources for RF00066-138 Gene