Aliases for RF00066-026 Gene

Data sources for RF00066-026 Gene:

RNA type for RF00066-026 Gene

snRNA

Aliases for RF00066-026 Gene

No data available for External Ids for RF00066-026 Gene

Summaries for RF00066-026 Gene

GeneCards Summary for RF00066-026 Gene

RF00066-026 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-026 Gene

Additional gene information for RF00066-026 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-026 Gene

Genomics for RF00066-026 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RF00066-026 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J071842 Enhancer 0.5 dbSUPER 250.7 +1.2 1155 2.1 ZNF600 PRDM6 PRDM10 REST ZMYM3 ZNF140 HLF ZNF24 SMARCA5 RNU7-38P RF00066-026 VSIR PSAP lnc-VSIR-1
GH10J071844 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -4.2 -4151 8.1 MYC IKZF1 ZNF600 JUND ZNF592 ZMYM3 POLR2A ZNF10 NFIC ZIC2 PSAP piR-51878-002 VSIR C10orf105 ANAPC16 MICU1 DDIT4 RNU7-38P RF00066-026
GH10J071835 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.2 6219 6.3 BCLAF1 SP1 ZNF654 IKZF1 ZNF600 ATF2 ZNF10 YY1 BCL11A REST VSIR ANAPC16 PSAP RF00066-026 RNU7-38P lnc-VSIR-1
GH10J071828 Enhancer 0.8 ENCODE dbSUPER 0.4 +14.1 14059 4.3 ZIC2 CTCF MNT KLF9 SMARCE1 MAX POLR2A EGR1 NRF1 NFATC1 PSAP VSIR C10orf105 RF00066-026 lnc-VSIR-1 RNU7-38P
GH10J071843 Promoter/Enhancer 0.5 Ensembl dbSUPER 0.7 +2.5 2493 0.2 RNU7-38P RF00066-026 PSAP lnc-VSIR-1 VSIR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-026 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00066-026 Gene

Latest Assembly
chr10:71,844,735-71,844,794
(GRCh38/hg38)
Size:
60 bases
Orientation:
Minus strand

Genomic View for RF00066-026 Gene

Genes around RF00066-026 on UCSC Golden Path with GeneCards custom track
RF00066-026 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

RF00066-026 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-026 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-026 Gene

Proteins for RF00066-026 Gene

Post-translational modifications for RF00066-026 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-026 Gene

Domains & Families for RF00066-026 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-026 Gene

Function for RF00066-026 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00066-026 Gene

Localization for RF00066-026 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-026 Gene

Pathways & Interactions for RF00066-026 Gene

PathCards logo

SuperPathways for RF00066-026 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00066-026 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00066-026 Gene

Drugs & Compounds for RF00066-026 Gene

No Compound Related Data Available

Transcripts for RF00066-026 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00066-026 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000069A0D4_9606 snRNA 60 1

Rfam: RF00066,

RF00066-026 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-026 Gene

No ASD Table

Relevant External Links for RF00066-026 Gene

GeneLoc Exon Structure for
RF00066-026

No data available for mRNA/cDNA for RF00066-026 Gene

Expression for RF00066-026 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-026 Gene

Orthologs for RF00066-026 Gene

No data available for Orthologs and Evolution for RF00066-026 Gene

Paralogs for RF00066-026 Gene

No data available for Paralogs for RF00066-026 Gene

Variants for RF00066-026 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-026 Gene

Disorders for RF00066-026 Gene

No disorders were found for RF00066-026 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-026 Gene

Publications for RF00066-026 Gene

No publications were found for RF00066-026 Gene.

No data available for Mastermind for RF00066-026 Gene

Products for RF00066-026 Gene

Sources for RF00066-026 Gene