RF00066-024 Gene (RNA Gene)

 

GC10P043459
GIFtS:
2
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Aliases for RF00066-024 Gene

Subcategory (RNA class) for RF00066-024 Gene

snRNA

Number of RNA Genes sources:

1 / 17

Aliases for RF00066-024 Gene

No data available for External Ids for RF00066-024 Gene

Summaries for RF00066-024 Gene

GeneCards Summary for RF00066-024 Gene

RF00066-024 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-024 Gene

Additional gene information for RF00066-024 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-024 Gene

Genomics for RF00066-024 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RF00066-024 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J043458 Enhancer 0.3 Ensembl 600.7 +0.7 736 0.4 NANOG RF00066-024 RNU7-193P ENSG00000230555 piR-56759-044 ZNF487 ZNF239
GH10J043459 Enhancer 0.2 Ensembl 600.7 +1.2 1236 0.2 RF00066-024 RNU7-193P piR-56759-044 ZNF487 ZNF239
GH10J043451 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.7 -3.7 -3659 5.8 HNRNPL CREB1 GATAD2A CTCF ZNF629 LEF1 IKZF1 NFKBIZ ZNF692 POLR2A ENSG00000230555 ZNF32-AS2 BMS1 EIF3LP2 RF00066-024 RNU7-193P piR-50308-049 lnc-FXYD4-4 ZNF487 ZNF239
GH10J043461 Enhancer 0.8 Ensembl ENCODE 0.7 +3.9 3936 1.2 CTCF REST RAD21 ZNF24 TRIM22 ZNF184 SMC3 ZBTB17 ZNF654 KDM1A ENSG00000230555 RF00066-024 RNU7-193P piR-56759-044 ZNF487 ZNF239
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-024 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RF00066-024 Gene

Genomic Locations for RF00066-024 Gene
chr10:43,458,065-43,458,128
(GRCh38/hg38)
Size:
64 bases
Orientation:
Plus strand

Genomic View for RF00066-024 Gene

Genes around RF00066-024 on UCSC Golden Path with GeneCards custom track
RF00066-024 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

RF00066-024 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-024 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-024 Gene

Proteins for RF00066-024 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RF00066-024 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-024 Gene

Domains & Families for RF00066-024 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-024 Gene

Function for RF00066-024 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00066-024 Gene

Localization for RF00066-024 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-024 Gene

Pathways & Interactions for RF00066-024 Gene

PathCards logo

SuperPathways for RF00066-024 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00066-024 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RF00066-024 Gene

Drugs & Compounds for RF00066-024 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RF00066-024 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RF00066-024 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006E7EE5_9606 snRNA 64 1

Rfam: RF00066,

RF00066-024 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-024 Gene

No ASD Table

Relevant External Links for RF00066-024 Gene

GeneLoc Exon Structure for
RF00066-024

No data available for mRNA/cDNA for RF00066-024 Gene

Expression for RF00066-024 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-024 Gene

Orthologs for RF00066-024 Gene

No data available for Orthologs and Evolution for RF00066-024 Gene

Paralogs for RF00066-024 Gene

No data available for Paralogs for RF00066-024 Gene

Variants for RF00066-024 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-024 Gene

Disorders for RF00066-024 Gene

No disorders were found for RF00066-024 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-024 Gene

Publications for RF00066-024 Gene

No publications were found for RF00066-024 Gene.

No data available for Mastermind for RF00066-024 Gene

Products for RF00066-024 Gene

Sources for RF00066-024 Gene