Aliases for RF00066-021 Gene

Subcategory (RNA class) for RF00066-021 Gene

snRNA

Quality Score for this RNA gene is

11

Aliases for RF00066-021 Gene

No data available for External Ids for RF00066-021 Gene

Summaries for RF00066-021 Gene

GeneCards Summary for RF00066-021 Gene

RF00066-021 is an RNA Gene, and is affiliated with the snRNA class.

Rfam classification for RF00066-021 Gene

Additional gene information for RF00066-021 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RF00066-021 Gene

Genomics for RF00066-021 Gene

GeneHancer (GH) Regulatory Elements for RF00066-021 Gene

Promoters and enhancers for RF00066-021 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J027229 Enhancer 0.8 ENCODE dbSUPER 750.6 +1.7 1717 1.9 FOXA1 SP1 RXRA FOXA2 JUND ZBTB33 GABPA HNF4A HNF4G REST RF00066-021 RNU7-12P MASTL ACBD5 RF00004-014 RNU2-24P
GH10J027238 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -9.2 -9219 5.3 PPP1R10 SIN3A ZBTB40 CTCF SIX5 ZBTB6 FOXA1 SMARCE1 POLR2A HDAC2 ACBD5 ENSG00000262412 MASTL ANKRD26 ABI1 YME1L1 RNU7-12P RF00066-021
GH10J027234 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.6 -2.0 -2027 0.9 ZNF121 ELF3 ZNF384 TCF7L2 FOXA2 WT1 FOSL2 ZNF664 FEZF1 PRDM6 MASTL YME1L1 FAM238B RF00066-021 RNU7-12P ACBD5
GH10J027235 Enhancer 0.4 Ensembl dbSUPER 0.6 -2.8 -2785 0.2 ZNF121 MASTL YME1L1 RF00066-021 RNU7-12P ACBD5
GH10J027224 Enhancer 0.5 dbSUPER 0.4 +7.8 7842 0.6 CTCF RAD21 ZNF121 TRIM22 ZNF18 MASTL YME1L1 ANKRD26 RNU7-12P RF00066-021 ACBD5 RNU2-24P RF00004-014
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RF00066-021 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RF00066-021 Gene

Genomic Locations for RF00066-021 Gene
chr10:27,232,255-27,232,316
(GRCh38/hg38)
Size:
62 bases
Orientation:
Minus strand

Genomic View for RF00066-021 Gene

Genes around RF00066-021 on UCSC Golden Path with GeneCards custom track

RF00066-021 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RF00066-021 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for RF00066-021 Gene

Proteins for RF00066-021 Gene

Post-translational modifications for RF00066-021 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RF00066-021 Gene

Domains & Families for RF00066-021 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RF00066-021 Gene

Function for RF00066-021 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RF00066-021 Gene

Localization for RF00066-021 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RF00066-021 Gene

Pathways & Interactions for RF00066-021 Gene

PathCards logo

SuperPathways for RF00066-021 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RF00066-021 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RF00066-021 Gene

Drugs & Compounds for RF00066-021 Gene

No Compound Related Data Available

Transcripts for RF00066-021 Gene

mRNA/cDNA for RF00066-021 Gene

(1) RNACentral transcripts :
(1) Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RF00066-021 Gene

No ASD Table

Relevant External Links for RF00066-021 Gene

GeneLoc Exon Structure for
RF00066-021

Expression for RF00066-021 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RF00066-021 Gene

Orthologs for RF00066-021 Gene

No data available for Orthologs and Evolution for RF00066-021 Gene

Paralogs for RF00066-021 Gene

No data available for Paralogs for RF00066-021 Gene

Variants for RF00066-021 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RF00066-021 Gene

Disorders for RF00066-021 Gene

No disorders were found for RF00066-021 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RF00066-021 Gene

Publications for RF00066-021 Gene

No publications were found for RF00066-021 Gene.

No data available for External Links for RF00066-021 Gene

Products for RF00066-021 Gene

Sources for RF00066-021 Gene